Gene Spro_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3496 
Symbol 
ID5604973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3872628 
End bp3874799 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content58% 
IMG OID640939049 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001479722 
Protein GI157371733 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTT TTATGATTCG CCTCTCCGGT GGCGCACTGC TGTGCCTGCC GGTGATGGTG 
GCGCAGGCTA CGGGGGCCGA GCAGGCTCCC CGCCCACAGA AAGAAGAAAC CCTGGAGGTG
GTCGCTTCGC CGTTCAGCGA TGACGGCAGC ACCGAGAACA CCGGCTCCTA CACCACCAGC
CAGATGACCA CCGCGACCGG CTTGCCGCTG AGCATCAAGG ATACGCCGCA GTCGGTTTCG
GTCATCACCC GCCAGCAAAT TGACGATATC AACGCTTATT CGCTGAAGGA TATTCTGCGC
TGGTCCACCG GCGTCAGCGA GAGTAACTAC GATAGCGAAC GCTCCTCGTT CAATTACCGC
GGTTTTAGCG TCGATAATTA TCAATACGAC GGCGTGCCCA CCTTCTTTGA TTCCGGTTAT
TCCGGCGGTG AGTCAGAAAT TGACTCGATC ACCCTCGATC ATGTCGAAAT CGTCCGGGGT
GCCGCCGGTT TGCTGAACGG CGTCGGTAAT CCGGGGGCGG CCATCAACCT GGTCAGAAAG
AAAGCCTCCA GCCTTTCGCC TTTTGCCCGC GTCGAACTCT CCGCCGGTTC CTGGGATCAC
TACCGCACCA CGGTCGATGT CGGCACACCG CTCAACGACG AAGGCACCGT CCGGGTACGC
GTCGCGGCCG CCGGCGAACG CAGCCACTCG TTTATGGACA GGCATCAGGA ACGTAAAGGC
ACAATCTATG GCACGCTGGA AGCCGATCTG AGCAGCGATA CATTGCTGCG CCTGGGCGCG
GATTATCAGC AGAACCGGCC TAAAGCCTCC ACCTGGGGCG GTGCCCTGCC GACCGGCTGG
TTCAGCGACG GCAGCGAGAT CAATTGGGAT CGCCACTACA GCGGCGCTTC TGACTGGTCG
AGCTGGGATA CCACGCTCAG CACCCAGTTC GCGACGCTGG AGCACCAGTT CGATAACGAC
TGGAAAGGCG TGGCTAACTA CACCCATAGC CGTCAGGCTT TCGATGCCAA AATGGCGATG
AGTCTTGGTG GGCTGATCGA TCCCGATACC TGGGCGGTGG AACCTTCAAG CCCTTATGCC
GGGCGTTATG AGGGTTACCG CGATCAACAT GCGGTCGACC TGAAACTGAA CGGTGATTTC
AGCCTGCTGG GCCGCAACCA CAAATTTGTG GTGGGCAGTT CTTCCGCCTG GCAGCACAGT
TACAGCACCT ATCGTAGTGC CAGCGCCTCA CAACTGTTTA GCGGCAGCTT ACTGGACTGG
AACGGTGGCC TGGGTGAACC CGAGTGGTCG GACAAAATGC CACAGATGGA TTACCGCACG
CGGCAAATCG GCTTCTACAG CAGCGCTGAC TTTTCGCTAA CCGACCGTCT GGATCTGGTG
CTCGGTGCCC GCTTCAACAG CTTTAAAAAC ACCACGACCA CCACCGCAAA CAAGGTCACG
CCGTTCGTCG GCACGGTTTA TAAGCTGACC GATCAGGTCT CTGCCTATGC CAGCTACACC
GACATCTTCA AGGATCAGAA CCTGCTCGAC AGCAGTGGCC ACTATCTGGC ACCAATCGAA
GGGGTGAACA AAGAGGTGGG TATCAAAGCC GCGTTGCTCA ATGACCGGCT CAACCTGTCG
CTGTCGGCAT TCCGCATCAC GCAGGACAAC CTGGGCGTGC TGGACGAAGA CACCACCAAT
CTGGACTGGC TGCAGCAGAC CTATCATGAG AGCCAGGGTG CCACCAGCAA GGGCATCGAG
TTCGAACTGA ACGGTGAGCT GGCCCAGGGC TGGAACGCGC AGTTTGGCAT CACGCACTTC
TCGCTGAAGG ACAAGGATAA GGTTGATCTC AACACCGAGC AGCCGCGCAC GCGTATCAAC
CTGTTCACCA CCTACCAACT GACGGGTGCC TTGCGCGACC TGACGCTGGG CGGCGGCGCA
CGCTGGCAGA GCAAGGTTTA CGCCAACGTT AGCGGGGCCG ATAACGGTGA AATGGTGCAG
CGCAAAGCCG AGCAAGGATC TTATGTCCTG GTCGATGCAA TGGCACGCTA CAGGCTGACG
CCGCAAACCT CGGTGCAACT TAACCTGAAC AACGTTTTCG ACCAGAAATA CTACTCGCAG
GTTAATTTCT ACAGTACCCG TAACTATGGC GAACCGCGTA ACTTCATGCT TACGCTCAAA
CACGAGTTCT GA
 
Protein sequence
MTSFMIRLSG GALLCLPVMV AQATGAEQAP RPQKEETLEV VASPFSDDGS TENTGSYTTS 
QMTTATGLPL SIKDTPQSVS VITRQQIDDI NAYSLKDILR WSTGVSESNY DSERSSFNYR
GFSVDNYQYD GVPTFFDSGY SGGESEIDSI TLDHVEIVRG AAGLLNGVGN PGAAINLVRK
KASSLSPFAR VELSAGSWDH YRTTVDVGTP LNDEGTVRVR VAAAGERSHS FMDRHQERKG
TIYGTLEADL SSDTLLRLGA DYQQNRPKAS TWGGALPTGW FSDGSEINWD RHYSGASDWS
SWDTTLSTQF ATLEHQFDND WKGVANYTHS RQAFDAKMAM SLGGLIDPDT WAVEPSSPYA
GRYEGYRDQH AVDLKLNGDF SLLGRNHKFV VGSSSAWQHS YSTYRSASAS QLFSGSLLDW
NGGLGEPEWS DKMPQMDYRT RQIGFYSSAD FSLTDRLDLV LGARFNSFKN TTTTTANKVT
PFVGTVYKLT DQVSAYASYT DIFKDQNLLD SSGHYLAPIE GVNKEVGIKA ALLNDRLNLS
LSAFRITQDN LGVLDEDTTN LDWLQQTYHE SQGATSKGIE FELNGELAQG WNAQFGITHF
SLKDKDKVDL NTEQPRTRIN LFTTYQLTGA LRDLTLGGGA RWQSKVYANV SGADNGEMVQ
RKAEQGSYVL VDAMARYRLT PQTSVQLNLN NVFDQKYYSQ VNFYSTRNYG EPRNFMLTLK
HEF