Gene Spro_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3489 
Symbol 
ID5604927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3862495 
End bp3864177 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content58% 
IMG OID640939042 
Productnitrate/nitrite sensor protein NarQ 
Protein accessionYP_001479715 
Protein GI157371726 
COG category[T] Signal transduction mechanisms 
COG ID[COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0416624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGTTA AACGTTCAGT GACCAGCAGC CTGGCCAAGG CGCTGTTTTG CATTGTGATT 
TTGTCCGTGC TCTCTACCGG GCTGGCGCTA ACCACCGTGG CTGACAGCCT GCGTGACGCC
GAAGCGGTCA ACATTGCCGG TTCGCTGCGC ATGCAGAGCT ACCGGCTGGC CTACGATCTC
ACTGGCCCGG CTCCGGAGCT GGAACAGCAT CTATTACAAT ATCGGCAATC CCTGCAGGCC
CCGGCGTTGC AGAAGTTGGA TCGTTTTTAC GTGCCAGCGG AAGTGCGGGA AAAGTACCTG
TCTTTGCAGC ATGCCTGGCA ACCCTTGGCG CAGCAGATCC AGGCCGGCCA GTCGGCCGAC
TATCAGGCCA ATATCGCCGG CTACGTTAAC CAGATTGACC ATTTCGTGTT GGCGCTACAG
CGTTATTCCG AGCTGAAACT GACTATTGTG GCGGCCATCA GCGTGCTGGG TTTTATCGCC
ATCATCGGCC TGGTGCTGTT TTGCATCCGT TTTATGCGCC GTCAGGTGGT GGCACCGCTG
AAGCATCTGG TGGATGCCAG CCAGCGCGTG CAACAGCGGG ACTTTAACCA CCCACCGCTG
GATACCGCCC TGCCGAATGA GCTGGGCGTT TTGTCGCAGG CCTTTACCGC CATGTCGGGC
GACCTGGCCA AGTTGTATGA GTCGCTGGAG CAGAAAGTGC AGGAGAAAAC CCAGCGTCTG
CAACAGGCGA ACAAGACGCT GGAGGTGCTG TACAACTGCT CGCAGGCACT TAACGTGCGG
CAGATAGACC AGCAGGCATT TGAGAAGATC CTGCACATCG TGCGCCAAAG TGAAGATTTG
CACTGCATCC GGCTAAACGT GGCGGACAGC CTCAGCGAAT GGCAATTGCG CAGCGGCCGC
CCTTCGCCGA CGCTGGCCTG GCAATCGCTG ACCATTATCC AGGGCGACAA ACCGCTGGGT
GAACTGAGTT GGCAGCATAA GGAACAGCCA CCACATCCGC ACCTGATGCA GAGCGTGGCC
AATATGCTGA GTCGTGGGGT TTATTTTAAC CGCGCGCAGA AACAGCATAT GCAATTCTTG
CTGATGGAAG AACGTGCCAC CATCGCCCGC GAGCTGCACG ATTCTCTGGC ACAGGCGCTG
TCGTTCTTGC GTATTCAGTT AACCCTGCTC AGGCGCACGC TGGCGGACAG CACCCCTGAA
GCCCAAGAGA TTATTAGCGA TTTTGACCAA GCGCTGGCCG ACGCCTATCG CCAACTGCGC
GAACTGCTGA CCACCTTCCG CCTGAACATT CAGGAGGCCG ATTTGAACAC CGCGCTGCAC
CAGTTGCTGG CGCCATTAAA GGTTCTTACT GACGCACGGA TTCAGTTACA CTGTCGGCTT
TCTTCCCAGG CGCTCAATGC CCAGCAGCAG GTGCATGCGC TACAGATTGT GCGCGAAGCG
GTGCTTAACG CCATCAAACA TGCCCAGGCA CAGGAAATCG TCATTCGCTG CGAAATGACG
GCCGAGGGTG ATAACAGCAT CAGCATCGCT GACGACGGTT GCGGCATCGC CAGCCTGAAT
GAACCTGAAG GTCATTATGG TCTGACCATC ATGAGCGAGC GCGCTGCGCG ACTGGGAGGA
ACGCTGCGCA TCCAGCGGGG TGAGCCGGAC GGCACGGAAG TCCGCCTGAC ATTCCCGCCA
TAA
 
Protein sequence
MLVKRSVTSS LAKALFCIVI LSVLSTGLAL TTVADSLRDA EAVNIAGSLR MQSYRLAYDL 
TGPAPELEQH LLQYRQSLQA PALQKLDRFY VPAEVREKYL SLQHAWQPLA QQIQAGQSAD
YQANIAGYVN QIDHFVLALQ RYSELKLTIV AAISVLGFIA IIGLVLFCIR FMRRQVVAPL
KHLVDASQRV QQRDFNHPPL DTALPNELGV LSQAFTAMSG DLAKLYESLE QKVQEKTQRL
QQANKTLEVL YNCSQALNVR QIDQQAFEKI LHIVRQSEDL HCIRLNVADS LSEWQLRSGR
PSPTLAWQSL TIIQGDKPLG ELSWQHKEQP PHPHLMQSVA NMLSRGVYFN RAQKQHMQFL
LMEERATIAR ELHDSLAQAL SFLRIQLTLL RRTLADSTPE AQEIISDFDQ ALADAYRQLR
ELLTTFRLNI QEADLNTALH QLLAPLKVLT DARIQLHCRL SSQALNAQQQ VHALQIVREA
VLNAIKHAQA QEIVIRCEMT AEGDNSISIA DDGCGIASLN EPEGHYGLTI MSERAARLGG
TLRIQRGEPD GTEVRLTFPP