| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3486 |
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| Symbol | |
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| ID | 5604924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 3858709 |
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| End bp | 3861195 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640939039 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001479712 |
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| Protein GI | 157371723 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.125149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA GTCGTCGAGA CTTCATGAAA GCAAACGCCG CGGTCGCCGC TGCGGCAGCC
GCCGGGCTGA CTATTCCTAC GGTGGTGCAG GCGGCGGCAG GCAGCGCCGA CTCTATAAAA
TGGGACAAAG CGCCCTGTCG TTTCTGCGGC ACCGGTTGTG GCGTGCTGGT CGGTACCCAG
AACGGCCGCA TTGTGGCCTC ACAGGGCGAT CCGGAAGCGG CGGTCAACCG TGGGTTGAGC
TGCATCAAAG GCTATTTCCT GCCAAAGATC ATGTACGGCA AAGATCGTCT GAATCAACCA
CTGCTGCGCA TGAAAGACGG CCAGTACCAC AAGGAAGGCG AGTTCACGCC GGTCAGTTGG
CAGCAGGCTT TCGACATCAT GGCCGAAAAG TTCAAGCAGG CCCTGAAAGA GAAAGGCCCA
GAGGCCGTTG GCATGTTCGG TTCCGGTCAG TGGACGGTGT GGGAAGGCTA TGCCGCCGCC
AAATTGCTCA AAGCCGGGCT GCGCTCCAAT AACCTGGATC CGAATGCCCG TCACTGTATG
GCGTCAGCGG TAGTGGGCTT TATGCGCACC TTCGGCATGG ACGAGCCGAT GGGCTGCTAT
GACGATATCG AGCAGGCCGA TGCCTTTGTG CTGTGGGGCT CCAACATGGC GGAGATGCAC
CCGATCCTGT GGTCGCGCAT CACTGACCGC CGCCTGAGCA ATGAGAAGGT CAACGTATCG
GTCCTGTCGA CTTTTGAGCA TCGCAGCTTC GAACTGGCGG ACAACGGCAT GGTGTTCACG
CCGCAGACCG ATCTGGCGAT CATGAACTAC ATCGCTAATT ACATCATTCA AAACAACGCG
GTAGATCAGG ACTTCCTTAA TCGGCACGTC AACTTCCGCC GTGGCGCGAC GGATATCGGC
TATGGCCTGC GCCCAACCGA CCCATTGGAA AAAGCGGCGA AAAACCCCGG CAGCGACGCT
TCGGACCCGA TGAGCTTCGA AGAATACAAA GCCTTTGTCG CGGACTACAC GCTGGAAAAA
ACGGCCAAAA TGAGCGGCGT GCCGGAAGAC CAACTGGAAG CGCTGGCAAA ACTGTATGCC
GATCCGAACA TCAAGGTGGT GTCGTACTGG ACCATGGGCT TTAACCAGCA TACGCGCGGC
GTATGGGCCA ACAACCTGTG CTACAACCTG CATCTGTTGA CCGGCAAAAT CTCCAAACCG
GGCTGTGGGC CGTTCTCACT GACCGGCCAG CCTTCCGCCT GCGGCACCGC CCGTGAAGTG
GGCACCTTTG CCCACCGTCT GCCGGCCGAC ATGGTGGTCA CCAACGAAAA ACATCGGCAG
ACCGCCGAGC AGAAGTGGCA GCTGCCGGCC GGTACCATTC CAGCCAAAGT CGGGTTGCAT
GCGGTAGCGC AGGATCGCGC GCTGAAAGAC GGCACGCTGA ACGCTTACTG GGTGATGTGC
AACAACAACA TGCAGGCCGG GCCGAACATC AATGAAGACC GGATGCCGGG CTGGCGTGAT
GCACGCAACT TTGTGGTGGT GTCGGATCCT TACCCGACCG TCAGCGCCCT GGCAGCCGAT
CTGATCCTGC CGACCGCCAT GTGGGTGGAA AAAGAGGGGG CCTACGGTAA TGCGGAGCGC
CGTACTCAGT TCTGGCGCCA GCAGGTGAAA GCGCCGGGCG AAGCCAAATC CGATCTGTGG
CAACTGGTGG AGTTCTCCAA ACGCTTTACG GTGGAAGAAG TGTGGCCGGC CGAATTACTG
GCACAGAAAC CGGAATATCG CGGTAAAACG CTGTACGACG TGCTGTTTGC CAACGGTGAG
GTCAATAAAT ACCCGCTGAC GGAGATCCCG GCAGATCAGC TTAACGATGA AGCTCGCGAC
TTCGGCTTCT ATCTGCAAAA AGGGCTGTTT GAAGAATATG CCGGCTTTGG TCGCGGTCAT
GGGCACGATC TGGCGCCGTT CGATAGCTAT CATCAGGCTC GAGGTCTGCG CTGGCCGGTG
GTGGAGGGCA AAGAGACGTT GTGGCGCTAC CGCGAAGGTA CTGACCCCTA CGTTAAAGCC
GGAGAAGAAG TGCGTTTCTA CGGCAAGCCG GACGGCAAGG CGGTGATCTT CGCGCTGCCA
TTCGAACCGG CGGCGGAAAG CCCGGATAAA GAATATGACC TTTGGTTATC CACCGGTCGG
GTGCTGGAAC ATTGGCATAC CGGTTCGATG ACGCGCCGGG TACCCGAGCT GCACCGTGCC
TTCCCGCAGG CGGTGGTGTT TATCCATCCG CTGGACGCCA AAAGCCGCAA CCTGCGCCGT
GGCGAGAAGG TCAGGGTGCT GTCGCGCCGT GGCGAATTGA TCAGCACGGT CGAAACTCGC
GGCCGCAACC GTCCGCCAAG AGGGCTGGTG TATATGCCGT TCTTTGATGC GGCGCAGCTG
GTCAATAACC TGACGCTGGA CGCCACCGAT CCGCTTTCCA AAGAGGTCGA TTTCAAGAAA
TGCGCGGTGA AGTTGGAGAA GGTGTGA
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| Protein sequence | MKLSRRDFMK ANAAVAAAAA AGLTIPTVVQ AAAGSADSIK WDKAPCRFCG TGCGVLVGTQ
NGRIVASQGD PEAAVNRGLS CIKGYFLPKI MYGKDRLNQP LLRMKDGQYH KEGEFTPVSW
QQAFDIMAEK FKQALKEKGP EAVGMFGSGQ WTVWEGYAAA KLLKAGLRSN NLDPNARHCM
ASAVVGFMRT FGMDEPMGCY DDIEQADAFV LWGSNMAEMH PILWSRITDR RLSNEKVNVS
VLSTFEHRSF ELADNGMVFT PQTDLAIMNY IANYIIQNNA VDQDFLNRHV NFRRGATDIG
YGLRPTDPLE KAAKNPGSDA SDPMSFEEYK AFVADYTLEK TAKMSGVPED QLEALAKLYA
DPNIKVVSYW TMGFNQHTRG VWANNLCYNL HLLTGKISKP GCGPFSLTGQ PSACGTAREV
GTFAHRLPAD MVVTNEKHRQ TAEQKWQLPA GTIPAKVGLH AVAQDRALKD GTLNAYWVMC
NNNMQAGPNI NEDRMPGWRD ARNFVVVSDP YPTVSALAAD LILPTAMWVE KEGAYGNAER
RTQFWRQQVK APGEAKSDLW QLVEFSKRFT VEEVWPAELL AQKPEYRGKT LYDVLFANGE
VNKYPLTEIP ADQLNDEARD FGFYLQKGLF EEYAGFGRGH GHDLAPFDSY HQARGLRWPV
VEGKETLWRY REGTDPYVKA GEEVRFYGKP DGKAVIFALP FEPAAESPDK EYDLWLSTGR
VLEHWHTGSM TRRVPELHRA FPQAVVFIHP LDAKSRNLRR GEKVRVLSRR GELISTVETR
GRNRPPRGLV YMPFFDAAQL VNNLTLDATD PLSKEVDFKK CAVKLEKV
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