Gene Spro_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3479 
Symbol 
ID5604866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3852136 
End bp3853086 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content55% 
IMG OID640939032 
Producttransaldolase A 
Protein accessionYP_001479705 
Protein GI157371716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.272335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAC TGGATGCACT CAAGCAGCTA ACCACGGTGG TAGCCGACAG CGGCGATATC 
GAATCGATCC GCCAGTTCGA ACCGCAAGAC GCCACCACCA ACCCTTCACT GATCCTGAAG
GCCGCTGCAC TGCCTCAGTA TAAGCCACTG ATCCTCGAAG CCCTGAGCTA TGCCCGCCAG
CAAGGTGGCA GCAAAGAAAC CCAATTGATT AATGCCTGCG ACAAACTGGC GGTCAATATC
GGCGTCGAAA TCCTGAAAAG CGTACCGGGC CGCATTTCCA CCGAAGTGGA TGCCCGCCTG
TCCTTCGACC GCGGTATGTG CGTGGCCAAG GCACGTAAAC TGATCGCGCT GTATCAGCAA
CAGGGCATCG ATAAGTCACG TATTCTGATC AAACTGGCTT CTACCTGGGA AGGCATCAAA
GCCGCCGAGG AGTTGGAAAA AGAAGGCATC AATACCAACC TGACGCTGCT GTTCTCTTTC
GCCCAGGCCC GCGCCTGCGC CGAAGCCGGC GTGTTCCTGA TTTCACCTTT CGTTGGCCGT
ATCTATGACT GGTATCAGGC TAAACAGCCT GCGGCTGACT ACGACGCAGA GCAGGATCCT
GGCGTGAAAT CAGTGCGCAA CATTTATGAA TACTACAAAC AGCACCGTTA TCAGACGGTG
ATCATGGGCG CCAGCTTCCG CAAGGTAGAG CAAATTCTGG CCCTGGCCGG TTGCGATCGC
CTGACCATCG CACCAAACCT GCTGGAACAA CTCAAGCACA GCGAGCAACT GGTCGAGCGT
AAATTGACGC CATCCACCGA AGGTTTCCAT CAGCCTGCCC CACTGGCCGA AGCTGACTTC
CGTTGGCAGC ACAATCAGGA CGCCATGGCG GTTGAAAAAC TGGCCGAAGG TATCCGCCTG
TTCGCCGTTG ACCAGCAAAA GCTGGAAGAT ATGCTGGCCG CTGAACTGTA A
 
Protein sequence
MNQLDALKQL TTVVADSGDI ESIRQFEPQD ATTNPSLILK AAALPQYKPL ILEALSYARQ 
QGGSKETQLI NACDKLAVNI GVEILKSVPG RISTEVDARL SFDRGMCVAK ARKLIALYQQ
QGIDKSRILI KLASTWEGIK AAEELEKEGI NTNLTLLFSF AQARACAEAG VFLISPFVGR
IYDWYQAKQP AADYDAEQDP GVKSVRNIYE YYKQHRYQTV IMGASFRKVE QILALAGCDR
LTIAPNLLEQ LKHSEQLVER KLTPSTEGFH QPAPLAEADF RWQHNQDAMA VEKLAEGIRL
FAVDQQKLED MLAAEL