| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3467 |
|---|
| Symbol | |
|---|
| ID | 5604800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3837672 |
|---|
| End bp | 3839807 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640939020 |
|---|
| Product | oligopeptidase B |
|---|
| Protein accession | YP_001479693 |
|---|
| Protein GI | 157371704 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1770] Protease II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CACTTCTGTC GGGCCGCCAG CGTTGGCGTG CGGCCACCTA TGCCGTGATT
TCATTGAGCT TATTGGGCCA GGCCGCCTGG GCGCAGCCGT TGGCGCCCAG CGCCGAGATT
ATCCCGCACC CATTAACCGC CCAGGGGGAA ACCCGGGTGG ATGATTATTA TTGGCTGCGT
GACGACAGCC GGCAAAATAA AAAGGTGCTG AATTATCTGA CGGCGGAAAA CCGTTATACC
GAGCAGATGA TGCAGCCGTA TAAAAAACTG CGCGATAGGC TGTATCAGGA AATGCTGGGC
CGCATCAGCC CGGAAGATCG CTCGGTGCCC TACCAACTTA ATGGGTATCG CTATCAGGAA
AGCTATGCGG CAGGTAAAGA CTTTGCCCTG TATCAACGTC AGGCTCTGAC TGCCGATGCG
CCGTGGCAAA CCTTGCTGGA CGCCAATCAG CGTGCTGCAG GGCAGGATTA TTACCGCTTG
GGTGGGATGG CGATCAGCCT GGATAACCAG CAGATGGCGA TCGCTGAAGA TCTGCAGGGG
CGCAGGCAGT ACCGGATTTC GCTGCGTGAA ATCGATAGCG GTAAATGGGC GCCGGAAGTG
ATTGAAAACA CCTCCGGTGA CATGGCGTGG GCCAATGACG GCAAGACGCT ATTTTATATT
CGCAACCACC CGCAGACCCT GTTGCCATAT CAGGTTTATC GCCATCAGTC CGGCACGCCG
GTTGCGGACG ACAAACTTGT CTATCAGGAA AATGATGGCG GGTTCTATTT GAGCCTGGGT
CGTTCTTCTT CGCGTGACTA CGTCATTATT ACCATCAGCG GCAATACCAC TTCCGAGGCA
CGGCTGATTG ACGCTAATCA GCCTCTGAGC ACGCCGGTGT TGTTTGCCGC GCGCAAGAAC
GGCCACGAGT ATTATGTAGA CCACTATCGC GGTGAGTTCT ATCTGCGATC CAACCACCAA
AGCCCGCATT TTGGTCTGTA TCACACCGCG GCAGTCGGCA AGCCATGGCA GGCGCTACTG
GCACCACAGG AAAAGCGCGA GGTGGAAGAC TTCACGGTGT TCCGCGACTG GCTGGTAGTG
AAGGAACGTG CTGATGGCCT GGTACAGCTA CGGCAAATCA GTTGGGACGG TAAAACCCAG
CGCAGTATTC CGTTCGACGA CGCCAGCTAT ATGGCCTGGC TGGGCTATAA CCCGGAGCCG
GACAACCAGC AGCTGCGCTA TGGCTATTCG GCGATGACAA CCCCGACCCG CACATACCAA
TGGGATCTCA ACAAAGGCGA GCGCACCCTG CTGAAACAGC AGGAAGTGAA GGGAGTGGAT
CCCAGCCAGT ACCACAGCGA GCGGGTGTGG ATTAACGCGC GTGACGGTGT GAAGGTGCCG
GTCTCGCTGG TCTACAACAA AGCCATGTTC AAACCGGGGC ACAGCCCGCT GCTGGTGTAC
GGTTATGGTG CCTATGGCAT GAGTATGGAT CCGGCCTTTA GCGCTAACCG CATTAGTTTG
CTGGATCGCG GTTTCGTTTA TGCGCTAATC CACGTGCGCG GTGGCGGTGA GCTGGGGCAG
AACTGGTACC AACAGGGCAA GTTGACTCAT AAGCCAAACA CCTTCAGTGA CTTTATCGAC
GCCACCCAGG CATTAATCCA ACAGGGTTAT GGTCAGCCGG GCCGTATTTA CGCCATGGGG
GGCAGTGCCG GCGGCCTGCT GATGGGGGCA GTGATTAATC AGGCACCGCA GTTGTATAAC
GCGGTGGTGG CGCAGGTGCC TTTTGTTGAT GTGCTGACCA CCATGCTGGA CGACAGCATT
CCGCTGACGG TCGGTGAATA CGAAGAGTGG GGCAATCCGA ATCAGCCGCA GGCCTATGCG
TTGATGAAGT CCTATAGCCC GTATGACAAC CTGGCTAAAC AGGCCTATCC GAACCTGCTG
GTCACCAGCG GCCTGTATGA CTCGCAGGTG CAATATTGGG AACCGGCCAA ATGGGTAGCC
AAACTGCGTC GTTTTAAACA GGGTGATTCA GTGTTGCTGC TGGCGACCGA TATGACGGCC
GGCCACGGCG GAAAATCGGG CCGCCTGACG CGGCTGGAAA ATAACGCGCT GGAATACAGT
TTTATTATGG CGATGGATCA GAAAACACAG AAATAA
|
|---|
| Protein sequence | MKQTLLSGRQ RWRAATYAVI SLSLLGQAAW AQPLAPSAEI IPHPLTAQGE TRVDDYYWLR
DDSRQNKKVL NYLTAENRYT EQMMQPYKKL RDRLYQEMLG RISPEDRSVP YQLNGYRYQE
SYAAGKDFAL YQRQALTADA PWQTLLDANQ RAAGQDYYRL GGMAISLDNQ QMAIAEDLQG
RRQYRISLRE IDSGKWAPEV IENTSGDMAW ANDGKTLFYI RNHPQTLLPY QVYRHQSGTP
VADDKLVYQE NDGGFYLSLG RSSSRDYVII TISGNTTSEA RLIDANQPLS TPVLFAARKN
GHEYYVDHYR GEFYLRSNHQ SPHFGLYHTA AVGKPWQALL APQEKREVED FTVFRDWLVV
KERADGLVQL RQISWDGKTQ RSIPFDDASY MAWLGYNPEP DNQQLRYGYS AMTTPTRTYQ
WDLNKGERTL LKQQEVKGVD PSQYHSERVW INARDGVKVP VSLVYNKAMF KPGHSPLLVY
GYGAYGMSMD PAFSANRISL LDRGFVYALI HVRGGGELGQ NWYQQGKLTH KPNTFSDFID
ATQALIQQGY GQPGRIYAMG GSAGGLLMGA VINQAPQLYN AVVAQVPFVD VLTTMLDDSI
PLTVGEYEEW GNPNQPQAYA LMKSYSPYDN LAKQAYPNLL VTSGLYDSQV QYWEPAKWVA
KLRRFKQGDS VLLLATDMTA GHGGKSGRLT RLENNALEYS FIMAMDQKTQ K
|
|---|
| |