Gene Spro_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3409 
Symbol 
ID5604002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3770617 
End bp3771309 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID640938956 
Productaspartate racemase 
Protein accessionYP_001479635 
Protein GI157371646 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGT TGGGCCTGCT GGGCGGCATG AGTTGGGAAT CAACCATACC TTATTACCGC 
ATGATCAATG AACAGGTGAA AGAGCGCCTC GGTGGCCTGC ATTCGGCCAA AATTGTGCTC
TACAGCGTCG ATTTTCACGA GGTTGAACGC CTGCAGCATC AGGGCGACTG GGACGGCGCG
GGGCGTTTAT TGGCTGCCGC TGCGGCCTCG CTGCGTGCCG CCGGTGCGCA GGCCATCGTC
ATTTGTACCA ACACCATGCA CAAGGTGGCG GATGCGGTTG AACAGGCCAG CGGCTTGCCG
TTGATTCATA TTGCCGACGC CACGGCATTG CAGGTGCGCC AACAGGACAT TCGCCGCGTC
GGGCTACTCG GCACGCGTTT TACCATGGAG CAGGAGTTTT ACCGTGGGCG CTTGCAGAAA
AAATACGGCA TCGAAGTGGT GACTCCGGTG GCGGCCGATC GCGACATTGT GCACCGTATT
ATTTATGAAG AGCTGTGCCT GGGGAAAATC CGTGATGCGT CGCGCGATGA GTACCGCCGC
ATCATCGGCG ACCTGGAACA GCAGGGGGCG CAAGGCATAA TTTTTGGCTG CACCGAGATT
GGCCTGCTGG TCAGCGCGCA GGATGCGTCA GTGCCGGTCT TCGACACCAC CGCCATCCAT
GCGCGCGCCG CAGCGGAATA CGCGCTCGCT TAA
 
Protein sequence
MKVLGLLGGM SWESTIPYYR MINEQVKERL GGLHSAKIVL YSVDFHEVER LQHQGDWDGA 
GRLLAAAAAS LRAAGAQAIV ICTNTMHKVA DAVEQASGLP LIHIADATAL QVRQQDIRRV
GLLGTRFTME QEFYRGRLQK KYGIEVVTPV AADRDIVHRI IYEELCLGKI RDASRDEYRR
IIGDLEQQGA QGIIFGCTEI GLLVSAQDAS VPVFDTTAIH ARAAAEYALA