Gene Spro_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3406 
Symbol 
ID5603957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3766777 
End bp3768003 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content56% 
IMG OID640938953 
Productmajor facilitator transporter 
Protein accessionYP_001479632 
Protein GI157371643 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00890] Oxalate/Formate Antiporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.913918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA AACCGGCAAA TCGCAGCTTA ATCGTTCTGG GTACCATCAT CTGCCAGATG 
GGTCTCGGTA CTATCTATAC CTGGAGTCTG TTCAACCAGC CGTTGGTCGA CAAGTTCCAC
TGGGGCCTAG CTGACGTCGC CACCACCTTC TCCATCACCA GCTTCTTCCT GGCCTTCGCC
ACTTTATTTG CCGGCAAACT GCAGGAACGC TTCGGGATCC GTAACCTGAC CCTGTGCTCT
GGCATCCTGG TGGGTCTGGG CCTGATTGCC AGCGCCTACG TCAGCTCACT GAATATGGTT
TATCTGCTGG CCGGGGTGGT GGTCGGTTTC GCGGTAGGTA TCGCTTATAT CTCTACCCTG
TCCAACCTGA TCAAATGGTT CCCGGCCAAC AAAGGGCTGA TCTCCGGTAT CTCGGTGGGG
GCTTTCGGTA GCGGTAGCCT GCTGTTCAAA TACGTTAACG CCGCGTTGAT TGCCGACGTT
GGTGTGTCCT CAGCCTTCTT CTACTGGGGT GCCATTGTGA TGGCGCTGAT TGTGCTGGGC
TCCCTGCTGT TGAAAGAGCC GGTACTGGTG AGCCAGTCTG CACAGCAAGG GACCAGCGGC
CTGGGCAATG ACTTCAGCGT CCGCCAAATG CTGGCGACCA AAGAAGCTTA CCTGCTGTTC
ATCATCTTCT TCGCGGCTTG TATGAGTGGT CTGTATCTGA TTGGTATCGT GAAAGACATG
GGCGTACAAC TGGCTGGGAT GGACCTGGCT ACCGCCGCCA ACACCGTTTC CGCCGTCGCC
ATCTTTAACA CCGCAGGCCG TATTATTCTG GGTACGCTGT CCGATAAAGT GGGCCGCATG
CGCGTCATCA GCTTTACCAT GCTGGTCACC GTTCTGGCGA TTGTGGCGCT GAGCTTCCTG
ACTCTGAACC ACACCCTGTT CTTCATCTGC GTCGGTGCCG TCGCCTTCTG CTTCGGTGGC
AACATCACCG TATTCCCAGC GATTGTCGGT GACTTCTTCG GCCTGAAAAA CCACAGCAAA
AACTACGGCA TCATCTATCA GGGCTTCGGT CTGGGCGCAC TGGCCGGTTC GTTTGTCGCC
AAATACTTCG GCGGCTTCCA TGCGACCTTC ATCGTGATTG GCGTGCTGTC AGTGGCTTCT
CTGATAATCA CCCTGTTCAT CAAGGCACCG AAAGCGGTAG CGCAGGAAGA AGAACACTTC
TCGCAGGCGC AGCTGGCAAA AGCCTAA
 
Protein sequence
MNTKPANRSL IVLGTIICQM GLGTIYTWSL FNQPLVDKFH WGLADVATTF SITSFFLAFA 
TLFAGKLQER FGIRNLTLCS GILVGLGLIA SAYVSSLNMV YLLAGVVVGF AVGIAYISTL
SNLIKWFPAN KGLISGISVG AFGSGSLLFK YVNAALIADV GVSSAFFYWG AIVMALIVLG
SLLLKEPVLV SQSAQQGTSG LGNDFSVRQM LATKEAYLLF IIFFAACMSG LYLIGIVKDM
GVQLAGMDLA TAANTVSAVA IFNTAGRIIL GTLSDKVGRM RVISFTMLVT VLAIVALSFL
TLNHTLFFIC VGAVAFCFGG NITVFPAIVG DFFGLKNHSK NYGIIYQGFG LGALAGSFVA
KYFGGFHATF IVIGVLSVAS LIITLFIKAP KAVAQEEEHF SQAQLAKA