| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3401 |
|---|
| Symbol | |
|---|
| ID | 5603786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3760588 |
|---|
| End bp | 3761823 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640938948 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001479627 |
|---|
| Protein GI | 157371638 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.313714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA ATAGTCCGCA ACGCCGTTTC ACGCGTATTG AACGTCTTCC CCCTTACGTA
TTCAACATCA CCGCCGAACT CAAGATGGCT GCGCGCCGTC GTGGCGAGGA TATCATCGAT
TTCAGCATGG GTAACCCCGA CGGGCCAACC CCGCCGCACA TCGTGGAAAA GCTCTGTACC
GTTGCCCAGC GTGACGATAC CCATGGCTAC TCCACTTCGC GGGGGATCCC GCGTTTGCGC
CGTGCCATTT CACGCTGGTA TGCCGATCGC TACCAGGTGG AGATCGATCC CGAAAGCGAA
GCCATTGTTA CCATAGGTTC AAAAGAAGGG CTGGCACACC TGATGCTGGC GACGCTCGAC
CACGGTGATA CCGTGTTGGT GCCGAATCCG AGCTATCCGA TCCACATTTA CGGTGCGGTG
ATTGCCGGTG CTCAGGTGCG TTCGGTGCCG CTGGTGGAGG GAGTGGATTT CTTTGGTGAG
CTGGAGCGCG CCATTCGTGA AACCATTCCA CGTCCGAAAA TGATGATCCT CGGCTTCCCG
TCAAACCCGA CAGCCCAGTG CGTAGAGCTG GACTTCTTTG AACGCGTGGT CGCGCTGGCC
AAACAGTACG ACGTGCTGGT GGTCCACGAT CTGGCCTATG CCGATATCGT TTATGACGGC
TGGAAAGCGC CCTCGATTAT GCAGGTACCC GGCGCCAAGG ATATCGCGGT GGAGTTTTTC
ACCCTGTCGA AAAGTTACAA TATGGCGGGC TGGCGCATCG GCTTTATGGT CGGTAACCCG
GAGCTGGTCA ACGCGCTGGC GCGGATTAAG AGTTATCACG ACTACGGGAC CTTCACTCCG
TTGCAGGTGG CTGCCATCGC CGCGTTGGAA GGCGATCAGC AGTGCGTGCG GGATATTGCG
GAACAGTACC GTCAGCGCCG CAATGTGCTG GTTAAAGGGC TGCATGAAGC GGGCTGGATG
GTGGAAAACC CGAAAGCGGC GATGTATGTC TGGGCAAAAA TTCCCGAGCC TTATGCGCAT
CTCGGTTCAC TGGAGTTTGC CAAACGTCTG TTGGCGGAAG CCAAGGTGTG CGTATCGCCG
GGCATTGGCT TTGGTGACTA CGGTGACACC CACGTGCGTT TCGCGCTGAT AGAAAATCAG
GATCGTATCC GTCAGGCAGT TCGCGGCATC AAAGCCATGT TCCGGGCTGA TGGGCTGATC
AAACCGGCCA AGAGTAGCCC GGCAACTACC AAATAA
|
|---|
| Protein sequence | MADNSPQRRF TRIERLPPYV FNITAELKMA ARRRGEDIID FSMGNPDGPT PPHIVEKLCT
VAQRDDTHGY STSRGIPRLR RAISRWYADR YQVEIDPESE AIVTIGSKEG LAHLMLATLD
HGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVEGVDFFGE LERAIRETIP RPKMMILGFP
SNPTAQCVEL DFFERVVALA KQYDVLVVHD LAYADIVYDG WKAPSIMQVP GAKDIAVEFF
TLSKSYNMAG WRIGFMVGNP ELVNALARIK SYHDYGTFTP LQVAAIAALE GDQQCVRDIA
EQYRQRRNVL VKGLHEAGWM VENPKAAMYV WAKIPEPYAH LGSLEFAKRL LAEAKVCVSP
GIGFGDYGDT HVRFALIENQ DRIRQAVRGI KAMFRADGLI KPAKSSPATT K
|
|---|
| |