Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3383 |
Symbol | |
ID | 5603375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3744350 |
End bp | 3745561 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640938929 |
Product | TPR repeat-containing protein |
Protein accession | YP_001479609 |
Protein GI | 157371620 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTT GGCTGATTAT TATTGTATTG CTGGTCGGCG CTGCGGCGTT ACTGGTGGTG CCGGCGATGC GCCAAAGCGA CAAAAGCACT GCCGCTAGCC GCGATACGCT GAATAAAGCA TTTTATCAGG ATCGCCTGCA CGAACTGGAG CAGGACGAAG ATCAGGGCGT GGTTACCGAG CGTCCGGAGA TGGTGAAGGA ACTGCAGCAA AATCTGCTCA ATGATATCCC CGGTCAGCAG GACGTGCAGG CGAAGCCGAT CAACCGTTGG GCGCTGGTGC CCGGCGTAGC GTTACTGGTG GTGGTCACCC TGGGCTTCTA TCTGAAAACC GGTGGGTTGG CGCAGGTGCT GGACTGGCAG CAGGTGGAAG CTCAAATGCC GGAACTGCGC GCTCGGGTTA GCAATGAGCG CGCCCAACCG CTGAGCATGG AAGAGATTGC TCGTCTCGGC CTGGGGCTGC GTACTGCGTT GCAACAGGAC GACCGCAATA TCAACGACTG GATGATGCTG GGCCGGGTCG GCATGGCATT GAATAACGCC ACCACCGCGA CTCAGGCATT CGCCCATGCT TATCAGCTCG ATCCGAATAG TCTGGAAGTG CGCCTCGGTT ATGCGGAAGT CTTGACGCGC TCCAACGATC CAGAGGATAA CAAGCAGGCC ACCCAGATGC TGCGCAAGAT GATCGCCGAA GATCATACCA ATCTGCGCGT GTTGAGCCTG TTGGCGTTTA ATTCCTTTGA GCAGGGCGAT TTCAAGCAGG CTATTGGTGC CTGGCAGGTC ATGCTGAAAC TGTTGCCGGC CAATGATCAA CGCGCCGAAG TGATAAAGCG CAGTATTGCA CAAGCAAAAA CACAGGCAGG CGGAGAAACT GTTAAACTTG GCGTTAACGT GACGTTATCG CCGCAGGCGA CTAATGCTTT GCCGCCGCAG GGGACGCTGG TAATCTCGGT GACCGATGGT GCCAATCCGG TGCCGGTGGC GGTAAAACAA CTGCCTTTAA GCCGTTTCCC CCTGTCATTC TCTTTGGATG ACAGCAATGC CATGATGCCT GAGCGGCTGC TTTCGGCCCA GCATCAGGTC AAGGTGCGGG TGCGGATTTC TCAGGACGGT CTGGCCACGC CACAGGCGGG TGACTGGTTC GGTGAGAGTG CGCTGCAGAA TTTCAGCGGT AAAGAGCAGA TTGACGTTCA GATAAACAAA CAGGTCCCCT GA
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Protein sequence | MAFWLIIIVL LVGAAALLVV PAMRQSDKST AASRDTLNKA FYQDRLHELE QDEDQGVVTE RPEMVKELQQ NLLNDIPGQQ DVQAKPINRW ALVPGVALLV VVTLGFYLKT GGLAQVLDWQ QVEAQMPELR ARVSNERAQP LSMEEIARLG LGLRTALQQD DRNINDWMML GRVGMALNNA TTATQAFAHA YQLDPNSLEV RLGYAEVLTR SNDPEDNKQA TQMLRKMIAE DHTNLRVLSL LAFNSFEQGD FKQAIGAWQV MLKLLPANDQ RAEVIKRSIA QAKTQAGGET VKLGVNVTLS PQATNALPPQ GTLVISVTDG ANPVPVAVKQ LPLSRFPLSF SLDDSNAMMP ERLLSAQHQV KVRVRISQDG LATPQAGDWF GESALQNFSG KEQIDVQINK QVP
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