Gene Spro_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3383 
Symbol 
ID5603375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3744350 
End bp3745561 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content57% 
IMG OID640938929 
ProductTPR repeat-containing protein 
Protein accessionYP_001479609 
Protein GI157371620 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID[TIGR03142] cytochrome c-type biogenesis protein CcmI 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTT GGCTGATTAT TATTGTATTG CTGGTCGGCG CTGCGGCGTT ACTGGTGGTG 
CCGGCGATGC GCCAAAGCGA CAAAAGCACT GCCGCTAGCC GCGATACGCT GAATAAAGCA
TTTTATCAGG ATCGCCTGCA CGAACTGGAG CAGGACGAAG ATCAGGGCGT GGTTACCGAG
CGTCCGGAGA TGGTGAAGGA ACTGCAGCAA AATCTGCTCA ATGATATCCC CGGTCAGCAG
GACGTGCAGG CGAAGCCGAT CAACCGTTGG GCGCTGGTGC CCGGCGTAGC GTTACTGGTG
GTGGTCACCC TGGGCTTCTA TCTGAAAACC GGTGGGTTGG CGCAGGTGCT GGACTGGCAG
CAGGTGGAAG CTCAAATGCC GGAACTGCGC GCTCGGGTTA GCAATGAGCG CGCCCAACCG
CTGAGCATGG AAGAGATTGC TCGTCTCGGC CTGGGGCTGC GTACTGCGTT GCAACAGGAC
GACCGCAATA TCAACGACTG GATGATGCTG GGCCGGGTCG GCATGGCATT GAATAACGCC
ACCACCGCGA CTCAGGCATT CGCCCATGCT TATCAGCTCG ATCCGAATAG TCTGGAAGTG
CGCCTCGGTT ATGCGGAAGT CTTGACGCGC TCCAACGATC CAGAGGATAA CAAGCAGGCC
ACCCAGATGC TGCGCAAGAT GATCGCCGAA GATCATACCA ATCTGCGCGT GTTGAGCCTG
TTGGCGTTTA ATTCCTTTGA GCAGGGCGAT TTCAAGCAGG CTATTGGTGC CTGGCAGGTC
ATGCTGAAAC TGTTGCCGGC CAATGATCAA CGCGCCGAAG TGATAAAGCG CAGTATTGCA
CAAGCAAAAA CACAGGCAGG CGGAGAAACT GTTAAACTTG GCGTTAACGT GACGTTATCG
CCGCAGGCGA CTAATGCTTT GCCGCCGCAG GGGACGCTGG TAATCTCGGT GACCGATGGT
GCCAATCCGG TGCCGGTGGC GGTAAAACAA CTGCCTTTAA GCCGTTTCCC CCTGTCATTC
TCTTTGGATG ACAGCAATGC CATGATGCCT GAGCGGCTGC TTTCGGCCCA GCATCAGGTC
AAGGTGCGGG TGCGGATTTC TCAGGACGGT CTGGCCACGC CACAGGCGGG TGACTGGTTC
GGTGAGAGTG CGCTGCAGAA TTTCAGCGGT AAAGAGCAGA TTGACGTTCA GATAAACAAA
CAGGTCCCCT GA
 
Protein sequence
MAFWLIIIVL LVGAAALLVV PAMRQSDKST AASRDTLNKA FYQDRLHELE QDEDQGVVTE 
RPEMVKELQQ NLLNDIPGQQ DVQAKPINRW ALVPGVALLV VVTLGFYLKT GGLAQVLDWQ
QVEAQMPELR ARVSNERAQP LSMEEIARLG LGLRTALQQD DRNINDWMML GRVGMALNNA
TTATQAFAHA YQLDPNSLEV RLGYAEVLTR SNDPEDNKQA TQMLRKMIAE DHTNLRVLSL
LAFNSFEQGD FKQAIGAWQV MLKLLPANDQ RAEVIKRSIA QAKTQAGGET VKLGVNVTLS
PQATNALPPQ GTLVISVTDG ANPVPVAVKQ LPLSRFPLSF SLDDSNAMMP ERLLSAQHQV
KVRVRISQDG LATPQAGDWF GESALQNFSG KEQIDVQINK QVP