Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3382 |
Symbol | |
ID | 5603374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3743556 |
End bp | 3744314 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640938928 |
Product | VacJ family lipoprotein |
Protein accession | YP_001479608 |
Protein GI | 157371619 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTTC GCCTGACTGG GCTGGCTTTC ACAACGGTGT TATTGGTGGG CTGTGCCAGC ACGCCACAAG ATGAACCACA AGGGCGATCC GATCCTCTGG AAGGATTTAA CCGGACGATG TTCAACTTTA ACTATAACGT CCTGGATCCG TATGTCCTGC GCCCGGTGGC CGTGGCCTGG CGTGACTACC TGCCGATGCC GGCGCGTAAT GGCATCAGCA ACTTCACCTC CAACCTGGAA GAGCCGGCCA GCATGGTCAA CTCCTTCCTG AAAGGTGATC CGTACAAGGG GATGATTCAC TTTAACCGTT TCTTCCTCAA CACCCTGTTG GGGATGGGCG GCCTGATCGA CGTGGCTGGC ATGGCTAACC CGAAACTGGC ACGCGAAGAG CCGAACCGTT TCGGCAGCAC TCTGGGGCAC TACGGTGTCG GCTATGGTCC TTATGTGATG TTGCCGGGCT ATGGCAGTTT CACCCTGCGT GAAGAGGGCG GTGACTGGGC AGATGACCTT TATCCGGTGC TGAGCTACCT GACCTTCTGG ATGTCGGCAG GCAAGTGGGT GGTTGAGGGG ATTGAAACCC GTGCCGAGCT GCTCGATTCC GACGGCCTGT TGCGTAACTC TTCCGATCCA TACCTGATGG TGCGTGAGGC CTACTTCCAG CGCAACGATT TCCTGGCGAA CGGTGGTTCA CTGAAACCGG AAGTTAACCC GAACGCCCAG GCGATCCAGG GTGATTTGGA CGAGATCGAC TCGCAATAA
|
Protein sequence | MNFRLTGLAF TTVLLVGCAS TPQDEPQGRS DPLEGFNRTM FNFNYNVLDP YVLRPVAVAW RDYLPMPARN GISNFTSNLE EPASMVNSFL KGDPYKGMIH FNRFFLNTLL GMGGLIDVAG MANPKLAREE PNRFGSTLGH YGVGYGPYVM LPGYGSFTLR EEGGDWADDL YPVLSYLTFW MSAGKWVVEG IETRAELLDS DGLLRNSSDP YLMVREAYFQ RNDFLANGGS LKPEVNPNAQ AIQGDLDEID SQ
|
| |