| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3379 |
|---|
| Symbol | fadI |
|---|
| ID | 5603341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3739916 |
|---|
| End bp | 3741226 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640938925 |
|---|
| Product | 3-ketoacyl-CoA thiolase |
|---|
| Protein accession | YP_001479605 |
|---|
| Protein GI | 157371616 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG CACTGCCGTT GGTGACCCGT CACGGTGACC GTATTGCGAT TGTAAATGGA
CTGCGCACCC CCTTTGCCAA ACAGGCGACC GCTTATCACG GTATTCCGGC GGTAGATTTG
GGTAAAACGG CGGTGAGTGA ACTGTTGGCC CGCACTGGCA TCGATCCTGC GTTGATCGAG
CAACTGGTGT TCGGCCAGGT GGTGCAAATG CCTGAAGCGC CGAATATTGC GCGTGAAATC
GTGCTCGGTA CCGGCATGAG CGTGCATACC GATGCCTACA GCGTGTCGCG TGCCTGCGCC
ACCAGTTTCC AGGCGATTGC CAACGTGGCG GAAAGCATCA TGGCCGGTAG CATCAGCATC
GGTATTGCCG GCGGCGCTGA CTCTTCTTCC GTTTTGCCTA TTGGCGTCAG CAAAGCGCTG
GCACGCACCC TGGTGGACGT TAACAAGGCC CGAACCCTGT CACAGCGCCT CAAATTGTTC
AGCCGACTGA AGTTCCGTGA CCTGATGCCG GTTCCCCCGG CGGTAGCGGA ATACTCTACG
GGTCTGCGAA TGGGCGATAC CGCCGAACAA ATGGCGAAAA GCCACGGCAT CACCCGTGAA
GAGCAGGATG CGTTGGCGCA CCGCTCGCAT CAGTTAGCGG CCAAAGCCTG GGAACAGGGG
CTGCTGCACG ATGAGGTGAT GACCGCCTAC GTGCCGCCGT ATCGCACCCA AATTAGCGAA
GACAACAACG TCCGCAAAGA CTCCAGCCTG GCTTCCTACG CGAAGCTGAA ACCGGCATTT
GACCGCAAGC ATGGCAGCGT TACCGCAGCC AACAGCACCC CCCTGACCGA CGGTGCGGCG
GCGGTACTGA TGATGAGTGA ATCGCGGGCG AAAGAGCTGG GCTTACAACC GCTGGGCTAC
CTGCGCAGCT TTGCCTTCTC CGCCATCGAC GTGTGGGAAG ATATGTTGCT TGGGCCGTCC
TACGCCACGC CGCTGGCGTT GGATCGCGCC GGTATCGGCC TGGCGGATCT GACGCTTATC
GACATGCATG AAGCTTTCGC CGCACAAACC CTGGCCAACC TGAAGATGTT TGCCAGTGAC
GAGTTTGCCC AGCAAAAATT GGGTCGCAGC CGGGCGATTG GTGAAGTGGA TATGGATAAA
TTCAACGTAT TGGGCGGCTC GATCGCCTAT GGCCACCCGT TTGCCGCTAC CGGCGCGCGC
ATGATCACCC AAACGCTGCA CGAGCTGAAA CGCCGTGGTG GCGGGCTGGG GTTGACCACC
GCCTGCGCGG CCGGAGGGTT AGGGGCCGCA ATGATCGTAG AGGTGGAATA A
|
|---|
| Protein sequence | MSKALPLVTR HGDRIAIVNG LRTPFAKQAT AYHGIPAVDL GKTAVSELLA RTGIDPALIE
QLVFGQVVQM PEAPNIAREI VLGTGMSVHT DAYSVSRACA TSFQAIANVA ESIMAGSISI
GIAGGADSSS VLPIGVSKAL ARTLVDVNKA RTLSQRLKLF SRLKFRDLMP VPPAVAEYST
GLRMGDTAEQ MAKSHGITRE EQDALAHRSH QLAAKAWEQG LLHDEVMTAY VPPYRTQISE
DNNVRKDSSL ASYAKLKPAF DRKHGSVTAA NSTPLTDGAA AVLMMSESRA KELGLQPLGY
LRSFAFSAID VWEDMLLGPS YATPLALDRA GIGLADLTLI DMHEAFAAQT LANLKMFASD
EFAQQKLGRS RAIGEVDMDK FNVLGGSIAY GHPFAATGAR MITQTLHELK RRGGGLGLTT
ACAAGGLGAA MIVEVE
|
|---|
| |