Gene Spro_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3340 
Symbol 
ID5602607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3696797 
End bp3697471 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content59% 
IMG OID640938886 
Producttwo component transcriptional regulator 
Protein accessionYP_001479566 
Protein GI157371577 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0836001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT TATTGGTTGA AGACCATCCC GAGTTATCCC ACTGGCTGCA AAAGGCGCTG 
ACCGGCGTCG GTTTTGCTGT CGACGTCGCG CCGGACGGGC TGGCGGCCGA CCACTTGTTG
TTAAACGAGA GCTATGCGCT GGTGGTACTG GATGTAGCGC TGCCGCGGCT GAATGGTCTG
GAACTGTTGG CCCGGCTGCG CAAGCGCGGG CAGGATTTGC CGGTGCTGTT GCTGACGGCC
AGAACCGACG TTGCCGATCG CGTCAAAGGG CTGAATCTGG GGGCCGACGA TTACCTGACC
AAACCGTTCG AACTCGATGA ATTGGAAGCG CGTATTCGGG CGTTGCTGCG CCGCAGCGTC
GGCGTTACCC AGCAGGCGCT GCAGTATGGT GCGCTGACCT ATCACGATGA AGGTTATTTC
CAACTCGACG ACAAACCGCT GCAGTTGACG CCCCGAGAGT TGGCGGTGCT GACCGCCTTG
ATCCACCGGC GTGGCCGCCC GGTTGCCAAA CAGCAGCTGT TTGAACAGGT ATTTACCCTG
TCTGATGAAG CCAACCCGGA AAGCATCGAA CTGTACGTTC ATCGGCTGCG GAAAAAGCTG
CAGGGCAGCA ATGTGGCGAT CATCACCCTG CGTGGTCTGG GCTACAGCCT GGAGCTTTGC
AATGAGGTGG TTTAA
 
Protein sequence
MRLLLVEDHP ELSHWLQKAL TGVGFAVDVA PDGLAADHLL LNESYALVVL DVALPRLNGL 
ELLARLRKRG QDLPVLLLTA RTDVADRVKG LNLGADDYLT KPFELDELEA RIRALLRRSV
GVTQQALQYG ALTYHDEGYF QLDDKPLQLT PRELAVLTAL IHRRGRPVAK QQLFEQVFTL
SDEANPESIE LYVHRLRKKL QGSNVAIITL RGLGYSLELC NEVV