Gene Spro_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3336 
Symbol 
ID5602543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3691375 
End bp3692496 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content59% 
IMG OID640938882 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001479562 
Protein GI157371573 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0136568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCC TGGTTGATGA AAATATGCCG TACGCGACTG AGTTGTTCAG TCGTTTGGGG 
AATGTGCAGG CGGTGCCTGG CCGTCCGATC CCGAGTGATG CGCTGGCCGA TGCCGATGCG
CTGATGGTGC GTTCGGTGAC TAAAGTGAAT GAAGCCTTGC TGGCCGGTAC CCGCATTGGT
TTTGTCGGCA CCGCGACCGC CGGTACCGAC CACGTAGACG ACGTTTGGCT GCAACAGCAG
GGCATCGGTT TTTCTGCCGC ACCGGGCTGC AACGCCATTG CGGTAGTGGA ATATGTGTTC
TCCGCGCTGA TGCTGCTGGC CGAACGCGAT GGTTTCCAAC TGCGGGATAA AACCGTCGGT
ATTATCGGTG TTGGCAATGT AGGCTCACGC CTGGATGCCC GCCTGAAAGC CTTGGGCGTC
CGTACCTTGT TATGCGATCC GCCGCGGGCT GAACGCGGTG ATGCCGGTGA GTTTTGGCCG
TTGGAAAAGC TGGTGGCGGA AGCCGATGTG CTCACTTTCC ATACGCCATT GAATAAATCC
GGCCCTTACA ACTCGCTGCA TCTGGTGGAC GCGGAACTGC TGGCGGCGTT GCCGGACAAT
CGCATTCTGA TCAACGCCTG TCGCGGTGCG GTGGTGGACA ATGCTGCGCT GTTGCAGGCA
CTGGAGAAAG GCAAAAAACT GAGTACCGTG CTGGACGTGT GGGAGCCGGA ACCGGAGCTT
TCGCTGCCGT TGCTGGCGCG GGTGGATATT GGCACCGCGC ATATTGCCGG TTACACGCTG
GAAGGCAAGG CACGCGGCAC CACTCAGGTG TTTGAGGCCT TCAGCCGCCA CCTGGGCCAG
CCGCAACAGA TAGAGCTGGC CTCGCTGCTG CCGGTGCCCG AATTCAGCCA GATCCAACTC
AATGGGCCGC TGGATGAAGG CAAATTAAAA CGATTGATGC ACTTGGTGTA TGATGTGCGC
CGCGATGATG CGCCGCTGCG CAAAGTGGCC GGGCAACCGG GCGAGTTTGA TCGTCTGCGC
AAGCATTACC AGGAACGCCG CGAATGGTCT TCATTACGCG TCCAGTGCGA TGACAGCGCC
AGTGCGGAGC TGTTGCACAA GCTGGGTTTC CTGACGGCAT AA
 
Protein sequence
MKILVDENMP YATELFSRLG NVQAVPGRPI PSDALADADA LMVRSVTKVN EALLAGTRIG 
FVGTATAGTD HVDDVWLQQQ GIGFSAAPGC NAIAVVEYVF SALMLLAERD GFQLRDKTVG
IIGVGNVGSR LDARLKALGV RTLLCDPPRA ERGDAGEFWP LEKLVAEADV LTFHTPLNKS
GPYNSLHLVD AELLAALPDN RILINACRGA VVDNAALLQA LEKGKKLSTV LDVWEPEPEL
SLPLLARVDI GTAHIAGYTL EGKARGTTQV FEAFSRHLGQ PQQIELASLL PVPEFSQIQL
NGPLDEGKLK RLMHLVYDVR RDDAPLRKVA GQPGEFDRLR KHYQERREWS SLRVQCDDSA
SAELLHKLGF LTA