| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3335 |
|---|
| Symbol | |
|---|
| ID | 5602539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3690274 |
|---|
| End bp | 3691284 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640938881 |
|---|
| Product | putative semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001479561 |
|---|
| Protein GI | 157371572 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0020501 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG GCTGGAATAT CGCTCTGCTT GGCGCCACTG GCGCGGTAGG TGAAGCGTTG
CTGGAATTAT TACAGGAACG CCAGTTCCCG GTGGGCGAAC TCTATCCATT GGCAAGTGAA
CGCAGCGCCG GTGCCACGGT GCGCTTCAAC GGCAAATCGG TACTGGTGCA AAACGCGGAA
GAATTTGACT GGTCACAGGC GCAGTTGGCG TTCTTCGTTG CCGGAACCGA GGCTTCGGCC
CGCTACGCGG AAGAAGCCGG CAACATGGGC TGCCTGGTGA TCGACACCAG CGGCCTGTTT
GCGCTGGAGC CGGACGTGCC GCTGGTGGTT CCTGGGGTGA ACCCACAGGT GCTGGCGGAT
TACCGCAACC GCAATATCGT TGCCGTGGCC GACAGCATGG TTAGCCAACT GCTGACCGCG
ATCAAACCGC TGACCGAACA GGCCGGGCTT TCCCGTCTGC ACGTCACCAC CCTGATGTCA
GTATCGGCAC GCGGCAAAGC GGCGGTCGAC GATCTGGCCG GTCAAAGTGC GCGCCTGCTG
AACGGCATTC CGGCTGAAGC GGGCGTTTTC GCCAAGCAGT TGGCGTTCAA CCTGCTGCCG
TTGCTGGCCG ACGAACAGGG CAGCGTGCGC GAAGAGCGTT TGATTGTCGA TCAGGTGCGT
AAAGTGCTGC AGGACGAAGG GCTGCCGATT TCCGTGAGCT GTGTGCAGTC GCCGGTGTTC
TACGGCCATG CGCAGGTGGT TCACCTGGAA GCGTTGCGCC CGATGTCTGC GGAAGAAGCG
CGCAGCGAGC TGGAACAGGT GGATGATATC CAACTGAGTG AAGAAGACGA CTACCCGACC
CAGGTGACGG AAGCCTCTGG CAGCGATGCG CTGAGCGTTG GCTGTTTGCG TAATGACTAT
GGTATTCCGG AAATCCTGCA GTTCTGGTCG GTGGCCGACA ACGTGCGTTT CGGCGGCGCG
CTGATGGCGA TCGAAACCGC AGAACGTCTG GTGCAGGAGC AGATGTACTG A
|
|---|
| Protein sequence | MSDGWNIALL GATGAVGEAL LELLQERQFP VGELYPLASE RSAGATVRFN GKSVLVQNAE
EFDWSQAQLA FFVAGTEASA RYAEEAGNMG CLVIDTSGLF ALEPDVPLVV PGVNPQVLAD
YRNRNIVAVA DSMVSQLLTA IKPLTEQAGL SRLHVTTLMS VSARGKAAVD DLAGQSARLL
NGIPAEAGVF AKQLAFNLLP LLADEQGSVR EERLIVDQVR KVLQDEGLPI SVSCVQSPVF
YGHAQVVHLE ALRPMSAEEA RSELEQVDDI QLSEEDDYPT QVTEASGSDA LSVGCLRNDY
GIPEILQFWS VADNVRFGGA LMAIETAERL VQEQMY
|
|---|
| |