Gene Spro_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3325 
Symbol 
ID5604538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3680580 
End bp3681266 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content55% 
IMG OID640938871 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001479551 
Protein GI157371562 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.462378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAG GCTATTCCCA ATTGATATTA GAGGGGGCTC TGGTGACGCT GGAGCTGGCC 
CTCAGTTCCG TACTGCTGGC GCTGGTCATC GGTTTGATCG GTGCCGGCGG CAAGCTTTCC
CAAAATCGCC TGCTTTCTAC CGTGTTTGGC GCTTATACCA CGCTGATCCG TGGCGTACCC
GATCTGGTGC TGATGCTGCT GATTTTCTAT GGCCTGCAAA TTGCGCTCAA CAACCTCACC
GAACTGCTTG GCTTCGCGCA AATCGATATT GATCCGCTCA GCGCGGGCAT AATCACCCTC
GGGTTTATCT ACGGCGCTTA TTTCACTGAA ACCTTTCGCG GTGCCTATAT GGCGGTGTCG
AAGGGGCAGA TTGAAGCGGC AACGGCCTAC GGTTTCACCG GTTCACAAAT TTTCCGCCGC
ATTCTGTTCC CTGCGATGAT GCGTTTTGCC CTGCCGGGCA TTGGCAACAA CTGGCAGGTG
ATCCTGAAGG CCACGGCGCT GGTGTCTATT CTGGGCCTCA ATGACGTGGT GAAAGCCACT
CAGTTGGCCG GCAAAGGCAC CTATCAGCCG TTCTTCTTTG CGATCGTGGC CGGTGTGGTT
TATCTGGTTT TCACAACCGT TTCCAATGGT GTGCTGCTGT GGCTTGAACG GCGTTATTCC
CTGGGCGTCC GGAGGGCTGA GCTATGA
 
Protein sequence
MLQGYSQLIL EGALVTLELA LSSVLLALVI GLIGAGGKLS QNRLLSTVFG AYTTLIRGVP 
DLVLMLLIFY GLQIALNNLT ELLGFAQIDI DPLSAGIITL GFIYGAYFTE TFRGAYMAVS
KGQIEAATAY GFTGSQIFRR ILFPAMMRFA LPGIGNNWQV ILKATALVSI LGLNDVVKAT
QLAGKGTYQP FFFAIVAGVV YLVFTTVSNG VLLWLERRYS LGVRRAEL