Gene Spro_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3324 
Symbol 
ID5604537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3679879 
End bp3680583 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content56% 
IMG OID640938870 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001479550 
Protein GI157371561 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.453192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TTTTACAACA GTACTGGCAA TCGCTGCTGT GGAGCGACGG TTACCGTTTC 
ACCGGGGTCG CCGTTACCCT GTGGCTGCTG ATTTCCTCGG TAGTGATGGG CGGTTTGCTG
GCGATCCCGA TGGCGGTGGC ACGCGTTTCC TCCATCACCT GGGTGCGTTT CCCGGTTTGG
CTCTACACCT ATATATTCCG TGGTACGCCG CTGTACGTGC AGCTGCTGGT GTTTTACTCC
GGTATGTACA GCCTGGAAAT CGTGCGTGGG ACGGACTTCC TCAACGCTTT CTTCCGCAGC
GGGCTCAATT GCACCATTTT GGCGCTAACG CTGAACACCT GTGCTTACAC CACCGAGATC
TTCGCCGGGG CGATACGCTC GGTATCGCAC GGTGAAATCG AAGCGGCCAA TGCTTACGGT
TTCTCACGTT TCAAAATGTA CCGCTGTATC ATTTTGCCTT CAGCACTGCG CACCGCGCTG
CCGGCCTACA GCAATGAAGT GATCCTGATG CTGCACTCGA CCGCGCTGGC GTTCACCGCC
ACCGTGCCGG ACCTGCTGAA GATAGCGCGA GATATCAATG CGGCGACCTA CCAGCCGTTC
TATGCCTTTG GCATTGCAGC GGTGCTGTAT CTGATCATCT CTTACGGATT AATCAGCCTG
TTCCGCAAGG CGGAAAAGCG CTGGATGGCA CACGTTAATC ACTGA
 
Protein sequence
MIEILQQYWQ SLLWSDGYRF TGVAVTLWLL ISSVVMGGLL AIPMAVARVS SITWVRFPVW 
LYTYIFRGTP LYVQLLVFYS GMYSLEIVRG TDFLNAFFRS GLNCTILALT LNTCAYTTEI
FAGAIRSVSH GEIEAANAYG FSRFKMYRCI ILPSALRTAL PAYSNEVILM LHSTALAFTA
TVPDLLKIAR DINAATYQPF YAFGIAAVLY LIISYGLISL FRKAEKRWMA HVNH