Gene Spro_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3310 
Symbol 
ID5603294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3666016 
End bp3667230 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content56% 
IMG OID640938856 
Productaminotransferase AlaT 
Protein accessionYP_001479536 
Protein GI157371547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000424805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA TTGAGAAATC CAGCAAACTG GACAACGTCT GCTATGACAT TCGCGGCCCG 
GTGCTCAAAG AAGCTAAACG TCTTGAAGAA GAAGGCCATA AAGTCCTCAA ACTGAACATT
GGTAACCCTG CCCCGTTTGG TTTTGACGCC CCTGACGAAA TCCTGGTCGA CGTGATCCGC
AATCTGCCCA CGGCGCAAGG CTATTCCGAC TCCAAAGGGC TCTTCTCGGC ACGTAAAGCG
ATCATGCAGC ACTACCAGGC GCGCGACATA CGTGACGTGA CCGTTGAGGA TATCTACATC
GGCAATGGGG TTTCCGAGCT TATCGTGCAA TCCATGCAGG CGCTGCTCAA CAGCGGCGAC
GAAATGCTGG TGCCGGCACC GGATTATCCG CTGTGGACCG CGGCGGTTTC GCTGTCCGGC
GGCAAAGCCG TGCACTACCT GTGTGATGAA GAAGCCGGCT GGTTCCCGGA TCTGGATGAT
ATCATCAGCA AGATCACCCC ACGCACCCGT GGCATTGTGA TCATCAACCC GAATAACCCG
ACCGGCGCGG TCTATAGCAA AGCACTGCTG GAGCAGATTG TTGAGATCGC CCGTCAGCAC
AACCTGATCA TCTTCTCCGA TGAGATCTAC GACAAAATTC TGTATGACGA AGCCGAGCAC
CATTCGATCG CTGCGCTGGC GCCGGATCTG CTGACCGTCA CCTTCAACGG GCTGTCCAAA
ACTTACCGCG TGGCCGGTTT CCGCCAGGGG TGGATGGTTC TGAACGGGCC AAAGAAACAT
GCCAAGGGCT ATATCGAAGG GCTGGAAATG CTGGCGTCGA TGCGTCTGTG CGCCAACGTG
CCGATGCAGC ACGCGATCCA AACGGCGTTG GGCGGTTACC AGAGTATCAA TGAATTTATT
CAACCCGGCG GCCGTCTGTA TGAACAGCGC AACCGCACCT GGGAGCTGTT GAACGAAATC
CCAGGGGTTT CCTGCGTGAA ACCTCAGGGC GCGTTGTATA TGTTCCCGCG CATCGATGCC
AAACGCTTTA ATATTCATGA TGACCAGAAA TTGGTGCTGG ATCTGCTGCT GCAGGAAAAA
GTGCTGCTGG TGCAGGGCAG CGCGTTCAAC TGGCCGTACC CGGACCACGT GCGCATAGTA
ACGCTGCCAC GTGTGGATGA ACTGGAAATG GCGGTGGGCA AACTGGGTCG TTTCCTGGAA
GGTTATCGCC AGTAG
 
Protein sequence
MSPIEKSSKL DNVCYDIRGP VLKEAKRLEE EGHKVLKLNI GNPAPFGFDA PDEILVDVIR 
NLPTAQGYSD SKGLFSARKA IMQHYQARDI RDVTVEDIYI GNGVSELIVQ SMQALLNSGD
EMLVPAPDYP LWTAAVSLSG GKAVHYLCDE EAGWFPDLDD IISKITPRTR GIVIINPNNP
TGAVYSKALL EQIVEIARQH NLIIFSDEIY DKILYDEAEH HSIAALAPDL LTVTFNGLSK
TYRVAGFRQG WMVLNGPKKH AKGYIEGLEM LASMRLCANV PMQHAIQTAL GGYQSINEFI
QPGGRLYEQR NRTWELLNEI PGVSCVKPQG ALYMFPRIDA KRFNIHDDQK LVLDLLLQEK
VLLVQGSAFN WPYPDHVRIV TLPRVDELEM AVGKLGRFLE GYRQ