Gene Spro_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3304 
Symbol 
ID5603344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3658571 
End bp3659923 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content58% 
IMG OID640938850 
ProductNADH dehydrogenase I subunit F 
Protein accessionYP_001479530 
Protein GI157371541 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0360562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG ACATTGTACG CACTCCCGAA ATGCACCCGC TGACCTGGCG GCTGCGCGAT 
GACAAACAGC CGGTCTGGCT GGATGAATAT CGCAGCAAGA ACGGCTATGC CGGTGCTGAA
AAGGCGATTA AAGGCCTGGC TCCGGACGAG ATCGTCACCC TGGTGAAAGA CGCCGGGCTG
AAAGGTCGCG GCGGTGCAGG TTTCTCCACC GGTCTGAAGT GGAGCCTGAT GCCGAAAGAC
GAATCCATGA ACATCCGTTA CCTGCTGTGT AACGCCGATG AAATGGAGCC GGGCACCTAT
AAAGACCGCT TGCTGATGGA GCAACTGCCG CACCTGTTGG TGGAAGGCAT GCTGATTTCG
GCGTTCGCGC TGAAGGCTTA TCGTGGCTAC ATCTTCCTGC GCGGTGAGTA CATCGAAGCT
GCGGTGCATT TGCGCCGTGC GATCGCCGAA GCCACCGAAG CCGGTTATTT GGGCAAGAAC
ATCATGGGCA GCGGCTTCGA CTTCGAGCTG ATTGTTCATA CCGGTGCCGG TCGTTACATC
TGTGGCGAAG AAACCGCCCT GATCAACTCG CTGGAAGGCC GCCGTGCCAA CCCGCGTTCC
AAGCCACCTT TCCCGGCTTC CTCCGGCGTT TGGGGCAAAC CGACCTGCGT CAATAACGTA
GAAACCCTGT GTAACGTTCC GGCGATCCTG GCGAACGGCG TTGAGTGGTA CAAGGGGATC
TCCGCCGGTA AGAGTAACGA TGCCGGTACC AAACTGATGG GCTTCTCCGG CCGGGTGAAA
AACCCAGGCG TTTGGGAGCT GCCGTTTGGT ACCACCGCAC GTGAAATTCT GGAAGATTAC
GCCGGTGGCA TGCGTGACGG TCTGCGTTTC AAAGCCTGGC AGCCAGGCGG CGCGGGCACC
GACTTCCTGA CCGCCGATCA CCTCGATCTG CCGATGGACT TCGAGAGCAT CGGTAAAGCC
GGCAGCCGTC TCGGTACTGC ACTGGCGATG GCAGTAGACC ACGAGATTGG CATGGTTCCG
CTGGTGCGCA ACCTGGAAGA GTTTTTCTCT CGCGAGTCCT GCGGCTGGTG TACGCCATGC
CGTGACGGTC TGCCGTGGAG CGTGAAGATC CTGCGTGCGC TGGAAAACGG CGAAGGGCAG
CCGGGGGATA TCGAAACCCT TGAGCAGCTG TGCCGTTCTC TCGGCCCGGG CAAAACCTTC
TGCGCCCACG CGCCAGGTGC CGTAGAGCCA CTGCAAAGCG CAATTAAATA TTTCCGTGAA
GAGTTCGAAG CGGGCATCAA AGTGAAGCAC TTCAGCAACG CGCATGCGAT TGGCGGTATT
CAGGCCAATA ATCTGCTGAA GCAACGCTGG TAA
 
Protein sequence
MIKDIVRTPE MHPLTWRLRD DKQPVWLDEY RSKNGYAGAE KAIKGLAPDE IVTLVKDAGL 
KGRGGAGFST GLKWSLMPKD ESMNIRYLLC NADEMEPGTY KDRLLMEQLP HLLVEGMLIS
AFALKAYRGY IFLRGEYIEA AVHLRRAIAE ATEAGYLGKN IMGSGFDFEL IVHTGAGRYI
CGEETALINS LEGRRANPRS KPPFPASSGV WGKPTCVNNV ETLCNVPAIL ANGVEWYKGI
SAGKSNDAGT KLMGFSGRVK NPGVWELPFG TTAREILEDY AGGMRDGLRF KAWQPGGAGT
DFLTADHLDL PMDFESIGKA GSRLGTALAM AVDHEIGMVP LVRNLEEFFS RESCGWCTPC
RDGLPWSVKI LRALENGEGQ PGDIETLEQL CRSLGPGKTF CAHAPGAVEP LQSAIKYFRE
EFEAGIKVKH FSNAHAIGGI QANNLLKQRW