Gene Spro_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3300 
Symbol 
ID5603379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3653648 
End bp3654208 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content55% 
IMG OID640938846 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001479526 
Protein GI157371537 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.792245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.731039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG CCTTTTATCT GGCAGGTTTT ATTGCGGTGA TCGCGACAAT TCGCGTGATC 
TCGCATACCA ATCCTGTGCA TGCGTTGCTG TATCTGATCG TCTCGTTACT GGCGATCTCT
GCAGTCTTTT TCTCACTCGG CGCTTACTTC GCCGCGGCAC TGGAAATCAT TGTCTACGCC
GGTGCCATCA TGGTGCTGTT CGTGTTCGTG GTGATGATGT TGAACCTCGG CAACGCGGTG
CAGCAACAAG AGCGCGATTG GCTCAAACCG TCGGTGTGGA TCGGCCCTGG CATCTTGTCG
CTGGCGCTGT TGGTGGTGCT GATTGTCGCT ATCCGCAGCG TGTCCGATCA GGGCATCAGC
GGTGAGATGG TTGACGCTAA AGCGGTGGGG ATCAGCCTGT TTGGTCCTTA CGTTCTGGCG
GTTGAGCTGG CTTCAATGCT GCTGTTGGCA GGTTTGGTTG TTGCCTTCCA CATTGGCCGT
GAGCACAAAC CGGGTGAGGT GTTGAGCAAC GCCCCGGCCG GTAGCGAAAT GGCGAGAAGA
AAATCGGAGG AGCAAGCATG A
 
Protein sequence
MEIAFYLAGF IAVIATIRVI SHTNPVHALL YLIVSLLAIS AVFFSLGAYF AAALEIIVYA 
GAIMVLFVFV VMMLNLGNAV QQQERDWLKP SVWIGPGILS LALLVVLIVA IRSVSDQGIS
GEMVDAKAVG ISLFGPYVLA VELASMLLLA GLVVAFHIGR EHKPGEVLSN APAGSEMARR
KSEEQA