Gene Spro_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3298 
Symbol 
ID5607405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3651505 
End bp3653352 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content58% 
IMG OID640938844 
ProductNADH dehydrogenase subunit L 
Protein accessionYP_001479524 
Protein GI157371535 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.982229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.619241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAT TATATTTAAC TATTCTGCTA CCGCTGATCG GGTTCCTGCT GTTGGCCTTC 
TCCCGAGGCC GCTGGTCTGA GAACACCTCG GCAATCGTCG GCGTAGGCTC TATCGGCCTG
GCTGCTCTGG TCACGGTCCA CGTGGGTATG GACTTCTTCG CCCAGAAAGC CACGGGTGTG
CAGCTGTTTG AGCAAAACCT GTGGAACTGG ATGAGCGTCG GTAATTTCAA TATCGGTGTG
ACCCTGACGC TGGACGGCCT GTCGCTGACC ATGCTGTCAG TGGTGACCGG CGTGGGCTTC
TTCATCCACA TGTTCGCTTC CTGGTACATG CGCGGTGAAG AGGGCTACTC ACGCTTCTTC
GCGTACACCA ACCTGTTTAT CGCCAGCATG GTGGTATTGG TACTTGCAGA CAACCTGTTG
CTGCTGTACC TGGGTTGGGA AGGCGTGGGC CTGTGCAGCT ACCTGTTGAT CGGTTTCTAT
TACAAGGATC CGGCCAACGG TGCGGCGGCA ATGAAAGCCT TCATCGTGAC CCGCGTCGGT
GACGTGTTCC TGGCATTTGC GCTGTTCATC CTCTACAACG AGCTGGGCAC GCTGAACATC
CGCGAACTGA TGATCCTGGC ACCGCAAAAA CTGGCGGTCG GCGATACGGC GATCACCTGG
GCTACGTTGA TGTTGCTGGG TGGTGCGGTC GGTAAATCGG CGCAGTTGCC GTTGCAGACC
TGGCTGGCAG ACGCGATGGC GGGTCCAACC CCGGTTTCTG CACTGATCCA CGCAGCAACC
ATGGTGACCG CGGGCGTTTA CCTGATTGCC CGTACTCACG GCCTGTTCCT GATGGCGCCG
GAAGTGCTGC ATCTGGTGGG CATTATCGGG GCGGTGACCC TGGTGCTGGC CGGCTTTGCC
GCGCTGGTGC AAACCGATAT CAAGCGCGTG CTTGCCTACT CCACCATGAG CCAGATTGGC
TACATGTTCC TGGCGTTGGG CGTACAGGCG TGGGATGCGG CTATCTTCCA CCTGATGACC
CATGCGTTCT TCAAGGCGCT GCTGTTCCTC TCCTCCGGTT CAGTGATCCT GGCCTGTCAT
CACGAGCAGA ACATCTTCAA GATGGGCGGC CTGCGCAAGA GCATTCCGCT GGTTTACGTC
TGCTTCCTGG TGGGTGGCGC TGCGCTGTCG GCACTGCCGC TGATCACCGC AGGCTTCTTC
AGTAAGGATG AGATCCTGGC CGGTGCGATG GCTAACGGTC ACATCAACCT GATGATTGCC
GGTCTGGTCG GTGCGTTCAT GACCTCGCTG TACACCTTCC GTATGATTTT CATCGTGTTC
CATGGCGAAG AGAAAATCAA AGCGCATGCC GGTAAAGGCA TCACTCACCA CCTGCCGCTG
TTGGTTCTGC TGGTGCTGTC CACCTTCGTT GGCGCGATGA TCGTTCCGCC ATTGCAGGGC
GTACTGCCAG ACACCACCGA GCTGGCGCAC GGTAGCGTGC TGCAACTGGA GATTACCTCC
GGCGTAGTGG CTATTGTCGG CATCCTGCTG GCGGCGGCGC TGTGGCTGGG CAAACGTAGC
CTGGTGACCC GCATTGCCAA TAGCGCACCG GGGCGTTTCT TCTCGACCTG GTGGTTCCAT
GCCTGGGGCT TCGACTGGCT GTACGACAAA GTGTTCGTCA AGCCGTACCT GGGTATTGCG
AAGTTGCTGC AGCGTGATCC GCTGAACTCG ATGATGAACC TGCCGGCCAT CTTCTCCCGC
TGGGGGAACC GAGGTCTGAC AGTGAGCGAG AACGGTCAGG TGCGTTGGTA TATAGCGTCT
ATGGGTGTGG GTGCAGTGGT CGTATTGGCT CTGTTGATTC TGGTTTAA
 
Protein sequence
MNLLYLTILL PLIGFLLLAF SRGRWSENTS AIVGVGSIGL AALVTVHVGM DFFAQKATGV 
QLFEQNLWNW MSVGNFNIGV TLTLDGLSLT MLSVVTGVGF FIHMFASWYM RGEEGYSRFF
AYTNLFIASM VVLVLADNLL LLYLGWEGVG LCSYLLIGFY YKDPANGAAA MKAFIVTRVG
DVFLAFALFI LYNELGTLNI RELMILAPQK LAVGDTAITW ATLMLLGGAV GKSAQLPLQT
WLADAMAGPT PVSALIHAAT MVTAGVYLIA RTHGLFLMAP EVLHLVGIIG AVTLVLAGFA
ALVQTDIKRV LAYSTMSQIG YMFLALGVQA WDAAIFHLMT HAFFKALLFL SSGSVILACH
HEQNIFKMGG LRKSIPLVYV CFLVGGAALS ALPLITAGFF SKDEILAGAM ANGHINLMIA
GLVGAFMTSL YTFRMIFIVF HGEEKIKAHA GKGITHHLPL LVLLVLSTFV GAMIVPPLQG
VLPDTTELAH GSVLQLEITS GVVAIVGILL AAALWLGKRS LVTRIANSAP GRFFSTWWFH
AWGFDWLYDK VFVKPYLGIA KLLQRDPLNS MMNLPAIFSR WGNRGLTVSE NGQVRWYIAS
MGVGAVVVLA LLILV