Gene Spro_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3289 
Symbol 
ID5607202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3640677 
End bp3641660 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content58% 
IMG OID640938835 
ProductLacI family transcription regulator 
Protein accessionYP_001479515 
Protein GI157371526 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC AACGCGTCAC GCTGCAGGAT ATTGCACTGC TCGCCGGTGT GACCAAAATG 
ACCGTCAGCC GCTATCTGCG CACGCCGGAC AAGGTGGCTG CCGAAACGGC TGCGAAAATT
GCCCAGGTGA TGAAAGAAGT TAACTTCACC GACAGCGATG AGGCGCGATC GTCCCAAAAG
CCGCGCATCG GCGTGCTGAT CCCCTCCTTC AACAACCAGA TCTTTGCCGA TCTGCTGGCC
GGCATCGAAT CCATCACCCT CGAACACGGC TATCAAACTC TGGTGGTTAA CTATGACTAC
AGCCGGCAGC GGGAAGAGGA ACAGATTATC CAACTGCTGG CCTACCCCAT CGCCGGGTTG
ATCCTCACCG ATTCGGAGCA CACCCTGCGG GCGGAAAAAT ATCTGGCGGC AACCAAAATC
CCGGTGGCGC AGGTAATGAG TCTTGAAGGG CCCGAGGGGC GGATCGCCGT GGGTTTTGAT
AACTATCAGG CGGGTTTTGA CATGACCGAA GCGCTGCTCG CCAGCGGGAA ACGCCAGGTG
GTTTACTTTG GTGCCATGTC CGACGCACGC GACACCAAGC GTTTCCAGGG CTATTGTCGG
GCGATGGAAA ATCAGGGACT GACGCCACGG CAAATCACGC CGCATCGGGT CTCGTCGGTC
TCGGTCGGTT CTGACATGCT GGCCATGGCC CGCCAGCTCT ACCCCAGTCT GGACGGCATT
TTGTGCACCA ATGACGATCT GGCGGTTGGC GTGTTGCAGG CGTGTCTGCG GCTCGGACTA
AAGGTGCCAC AGGACATTGC GCTGTCAGGT TTTCACGGTC TGGATATTGG CAAGGCCACC
ACGCCGGGCA TCGCCAGCGT GATCACCCCA AGGTTTGATA TGGGCAAAGT CGCCACAGAG
ATTTTACTCA AACGCATCAA AGGGGTGCCG TGCATCGAGC GCGTTGACCT GCACTACCGC
ATTTCACTCG GCGGCACCAT TTAA
 
Protein sequence
MKNQRVTLQD IALLAGVTKM TVSRYLRTPD KVAAETAAKI AQVMKEVNFT DSDEARSSQK 
PRIGVLIPSF NNQIFADLLA GIESITLEHG YQTLVVNYDY SRQREEEQII QLLAYPIAGL
ILTDSEHTLR AEKYLAATKI PVAQVMSLEG PEGRIAVGFD NYQAGFDMTE ALLASGKRQV
VYFGAMSDAR DTKRFQGYCR AMENQGLTPR QITPHRVSSV SVGSDMLAMA RQLYPSLDGI
LCTNDDLAVG VLQACLRLGL KVPQDIALSG FHGLDIGKAT TPGIASVITP RFDMGKVATE
ILLKRIKGVP CIERVDLHYR ISLGGTI