Gene Spro_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3265 
Symbol 
ID5606847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3601135 
End bp3602289 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content59% 
IMG OID640938811 
Productmajor facilitator transporter 
Protein accessionYP_001479491 
Protein GI157371502 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.025013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA CCTTGTGTAA TGAACAGCAG AAACCCGGCG TCCCGGCACA GATCGCAACG 
CGTTTGGCCT TTTTTGTCGC CGGCTTCGGC ATGGCTGCCT GGGCTCCCCT GGTCCCTTTC
GCCAAAGCGC GTATCGGCAT TGATGACGGC TCCCTGGGTC TGCTGCTGCT GTGTATTGGC
GCAGGTTCGA TGTTGGCGAT GCCGCTTACC GGCTTCCTGA CCGGCAGGTT GGGCTGTCGC
CCGGTGATCC TGCTGGCCGG GCTGGCACTG TGTATTGATT TACCCCTGCT GGTCCTGATG
GACACCACCA CCGGTATGGC ACTGGCCCTG CTGTTGTTTG GTGCGGCAAT CGGCATGATC
GATGTGTCGA TGAACATACA GGCGGTAGTG GTCGAGCGCG CCAGCGGCAA GGCAATGATG
TCCGGCTTTC ACGGTTTCTT CAGCGTTGGC GGCATTGCCG GTGCCGGCGG TGTTAGTGTG
ATGCTGTGGC TGGGGCTGTC TCCTTTGCTG GCAACATGGG TCGCCGTATT GACCATTGCC
GCATTGCTGA TGCTGGCCAG TCGCAATTTG CTGCGTGAAA GCGGCGGTGA CGAAGGTGGC
CCGATGTTTG TGCTGCCACG CGGTTGGGTG ATGTTCATTG GCATCCTGTG CTTCATTATG
TTCCTGGCAG AAGGTTCGAT GCTCGACTGG AGCGCCCTGT TTCTCACCAC CCTGCGAGGC
GTTGACCACA GCCAGGCCGG ATTGGGCTAT GCGCTGTTCT CCATCACCAT GACCATCGGC
AGATTGAACG GCGATTGGGT GGTAAACCGG CTGGGCAGAT ATAAAGTATT GCTGCTGGGT
AGCCTGTGTG CGGCCATTGG CCTGAGTCTG GCCATTATCT TCAACAACGC CATGGTTTCA
CTGATTGGTT TTATGCTGGT GGGCCTCGGC GCTTCCAACG TGGTACCGAT CCTGTTCAGT
GCTGCCGGCA ACCAGCAGGA TATGCCGGCA AATCTGGCCA TCGCATCAGT GACCACCGTC
GGCTACGCCG GCATCCTCGC CGGACCGGCG CTGATTGGCT TTATCGCTCA GTTCTCCAGC
CTGACGGCGG CATTTGCCTG CGTTGCAGTT TTACTCCTGG TGGTCACCGC CAGCGCCCGG
GCGATAACCC GTTGA
 
Protein sequence
MTSTLCNEQQ KPGVPAQIAT RLAFFVAGFG MAAWAPLVPF AKARIGIDDG SLGLLLLCIG 
AGSMLAMPLT GFLTGRLGCR PVILLAGLAL CIDLPLLVLM DTTTGMALAL LLFGAAIGMI
DVSMNIQAVV VERASGKAMM SGFHGFFSVG GIAGAGGVSV MLWLGLSPLL ATWVAVLTIA
ALLMLASRNL LRESGGDEGG PMFVLPRGWV MFIGILCFIM FLAEGSMLDW SALFLTTLRG
VDHSQAGLGY ALFSITMTIG RLNGDWVVNR LGRYKVLLLG SLCAAIGLSL AIIFNNAMVS
LIGFMLVGLG ASNVVPILFS AAGNQQDMPA NLAIASVTTV GYAGILAGPA LIGFIAQFSS
LTAAFACVAV LLLVVTASAR AITR