| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3264 |
|---|
| Symbol | |
|---|
| ID | 5606846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3599191 |
|---|
| End bp | 3600303 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640938810 |
|---|
| Product | outer membrane porin protein C |
|---|
| Protein accession | YP_001479490 |
|---|
| Protein GI | 157371501 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00668257 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GAGTACTCTC CCTGATAGTA CCCGCACTGC TGGTTGCAGG CACAGCAGGC
GCGGCGGAAA TCTACAACAA AGACGGTAAT AAACTGGATT TGTTCGGTAA AATCGATGGT
CTTCACTATT TTTCCGATGA TAAAGGTTCC GATGGCGACC AGTCTTATAT GCGTTTTGGT
CTGCGTGGCG AAACACAAAT CAGTGACCAA CTGACCGGCT ACGGTGAGTG GGAATATCAG
GCAAACCTCA ACCGTGCGGA AAACCAGGAC AACAATAACT TCACTCGTGT TGGTTTTGCA
GGTTTGAAAT TCAGTGATTA CGGTTCATTG GATTACGGCC GTAACTACGG CGTGCTGTAC
GACATCGGCG CATGGACCGA CGTGCTGCCA GAGTTCGGTG GCGATACCTA CGGTGCGGAC
AACTTCATGT TCCAGCGTAC CAACGGCGTG CTGACTTACC GTAACTCAGA CTTCTTTGGT
CTGGTTGACG GCCTGAACTT TGCTCTGCAA TACCAGGGCA AAAACGACAG CGCTACCGAA
TCCAACAACG GTCGTGACGT GTTGGCGCAG AACGGTGACG GTTACGGCAT GTCCGCGTCT
TACGATCTGG GCTACGGTAT CAGCGCTGCA GCGGCGTACT TCTCTTCCGA CCGTACCAAC
GATCAGAACG GCAATAACAA CGCCGGCATT CTGGGCCGTG GTGACAAGGC AGAGGCTTAC
AGCGGCGGTC TGAAATATGA CGCCAACAAC GTCTACCTGG CAGCGATGTA TACTCAGTCT
TACAACGCAA CCCGTTTCGG CAGCAGCAAC AGCAGCACTT ACGGTTACGC CAACAAAGCG
CAAAACATGG AAATCGTTGC CCAGTACCAG TTCGATTTCG GTCTGCGTCC TTCCGTGGCT
TACCTGCAGT CTAAAGGCAA AGACATCGAA CGCGGTTACG GCGATCAGGA TCTGATGAAG
TATGTTGATG TGGGCGCGAC CTACTACTTC AACAAAAACA TGTCTACCTA CGTTGATTAC
AAAATCAACC TGATGGATGA AAATGACTTC ACCAAGTCTG CCGGTATCAA CACCGACGAC
GTGGTTGCCG TGGGCCTGGT TTACCAGTTC TAA
|
|---|
| Protein sequence | MKLRVLSLIV PALLVAGTAG AAEIYNKDGN KLDLFGKIDG LHYFSDDKGS DGDQSYMRFG
LRGETQISDQ LTGYGEWEYQ ANLNRAENQD NNNFTRVGFA GLKFSDYGSL DYGRNYGVLY
DIGAWTDVLP EFGGDTYGAD NFMFQRTNGV LTYRNSDFFG LVDGLNFALQ YQGKNDSATE
SNNGRDVLAQ NGDGYGMSAS YDLGYGISAA AAYFSSDRTN DQNGNNNAGI LGRGDKAEAY
SGGLKYDANN VYLAAMYTQS YNATRFGSSN SSTYGYANKA QNMEIVAQYQ FDFGLRPSVA
YLQSKGKDIE RGYGDQDLMK YVDVGATYYF NKNMSTYVDY KINLMDENDF TKSAGINTDD
VVAVGLVYQF
|
|---|
| |