Gene Spro_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3253 
Symbol 
ID5606718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3588196 
End bp3589953 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content58% 
IMG OID640938796 
Producttype III restriction protein res subunit 
Protein accessionYP_001479479 
Protein GI157371490 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.503255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.463212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTA CTCTACGCCC CTACCAACTG GAAGCGGTCG AAGCCACCAT CAAACATTTC 
CGTCAGCACC CACAACCGGC GCTGATCGTG CTGCCGACCG GAGCCGGTAA AAGCCTGGTG
ATCGCCGAGT TGGCGAAGCG CGCGCGTGGC CGGGTATTGG TGCTGGCTCA TGTGAAAGAA
CTGGTGGCGC AAAACCACGC CAAATACCGC GCCTACGGGT TGGAAGCCGA TATCTTTGCC
GCCGGGCTGC AGCAAAAAGA CAGCGCCAGC AAGGTGGTAT TCGGCAGCGT ACAATCCGTG
GCGCGTAACC TGCCATTGTT TGACGGTGCG TTTTCGCTGT TGATTATCGA CGAATGCCAC
CGCATCAGCG ACGATGACGA CAGTCAGTAC CAGCAGATTA TTCAGCATCT GCAAAAAACC
AATCCGCAAT TGCGGCTATT GGGCCTGACC GCCACGCCCT ACCGGCTGGG CAAAGGCTGG
ATTTATCAGT ATCACTATCA CGGTTTTACC CGTGGCGATG CCAACAGTCT GTTTCGTGAC
TGCATCTATG AACTGCCGCT GCGCTACATG ATCAAAAACG GCTTCCTGGT GCCGCCGGAA
AGGCTGGATA TGCCGATTGT GCAGTATGAT TTCAGCCGTC TGGAGGCCAG AAGCAACGGC
CTGTTCAGTG AGATCGACCT GAACCGTGAG CTGAAGCAGC AAAATCGCAT TACGCCGCAC
ATCATCAGCC AGATCGTTGA ATATGCCGAA ACGCGTAAAG GGGTAATGAT TTTCGCCTCC
ACCGTTGAGC ACGCCCGTGA AATTCACGGC CTGCTGCCCC AGGGTGAAGC CGCGCTGGTC
AGCGCCGAAA CACCGACCAG CGAGCGTGAT GCGCTGATAG AGGCTTTCAA ACAACAGCAA
TTGCGCTACC TGGTCAACGT GGCGGTACTG ACCACCGGCT TTGATGCACC GCATGTCGAT
CTGATCGCTA TTCTGCGCCC AACCGAATCC GTCAGCCTGT ATCAGCAAAT CGTCGGGCGT
GGGCTGCGGC TGGCCCCCGG CAAGGAAGAT TGCCTGATCC TCGACTACGC CGGTAACCCG
CACGACCTGT TTACCCCAGA GGTCGGGGTC AGTAAGCCAC ACGGCGACAG TCAGCCGGTA
CAGGTGTTCT GCCCCGGCTG CGGCTTCGCC AACCTGTTTT GGGGCAAATG CACCGAGAAC
GGCGATATCA TCGAACACTA TGGTCGCCGT TGTCAGGGCT GGCTGGAGGA TGATGAAGGC
CATCGCGAGC AGTGCGATTA CCGCTTCCGC TTCAAGATTT GCCCGCATTG CGGCGCTGAG
AATGACATTG CCGCCCGCCG CTGCCACCAG TGTCAGGAAG TCTTGGTCGA TCCTGACGAT
ATGCTGAAGG CTGCGCTGAA GTTGAAAGAC GCTTTGGTAT TGCGCTGTGG CGGCATGGAG
CTGCAAAGCG GCCGTGATGA AAAAGGCGAA TGGTTGAAAG CCACTTATTA CGACGAAGAC
GGCACCAGCA CCAGTGAACG TTTCCGGCTA CAGACCCCAG CGCAGCGCAA AGCCTTCGAA
ATGCTGTTCC TGCGCCCGCA TCAGCGTGCG CCAGGAGTCC CTTTTGCCTG GCAAACCGCT
GCCGACGTGC TGGCCCAGCA AGCGGCCTTG CGCCATCCGG ATTTTGTAGT GGCACGCAAA
CGCGGGCAGT TCTGGCAGAT ACGGGAAAAA GTGTTCGATT ATCAAGGCCG CTTCCGCCGT
GCCAACGAGC TGTCTTGA
 
Protein sequence
MAFTLRPYQL EAVEATIKHF RQHPQPALIV LPTGAGKSLV IAELAKRARG RVLVLAHVKE 
LVAQNHAKYR AYGLEADIFA AGLQQKDSAS KVVFGSVQSV ARNLPLFDGA FSLLIIDECH
RISDDDDSQY QQIIQHLQKT NPQLRLLGLT ATPYRLGKGW IYQYHYHGFT RGDANSLFRD
CIYELPLRYM IKNGFLVPPE RLDMPIVQYD FSRLEARSNG LFSEIDLNRE LKQQNRITPH
IISQIVEYAE TRKGVMIFAS TVEHAREIHG LLPQGEAALV SAETPTSERD ALIEAFKQQQ
LRYLVNVAVL TTGFDAPHVD LIAILRPTES VSLYQQIVGR GLRLAPGKED CLILDYAGNP
HDLFTPEVGV SKPHGDSQPV QVFCPGCGFA NLFWGKCTEN GDIIEHYGRR CQGWLEDDEG
HREQCDYRFR FKICPHCGAE NDIAARRCHQ CQEVLVDPDD MLKAALKLKD ALVLRCGGME
LQSGRDEKGE WLKATYYDED GTSTSERFRL QTPAQRKAFE MLFLRPHQRA PGVPFAWQTA
ADVLAQQAAL RHPDFVVARK RGQFWQIREK VFDYQGRFRR ANELS