| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3248 |
|---|
| Symbol | |
|---|
| ID | 5606573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3582344 |
|---|
| End bp | 3583369 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640938791 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001479474 |
|---|
| Protein GI | 157371485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.02975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCT TAAGCCCGAT TAATCAGGCT CGTTGGGCAC GTTTTTGCAG CAACCGCCGT
GGCTATTGGT CGCTGTGGAT TTTTCTGGTG CTGTTTATCC TCAGCCTGGG GGCCAACCTG
ATCGCTAACG ACAAGCCGCT ACTGGTGCGC TACGAGGGCC GCCTGTACCT GCCGTTTATT
ATCGACTACA GCGAAACCAC CTTCGGCGGT GAGCTCAATA CCGCCACCGA CTATCAGGAT
CCGTTTGTTA AAAAGCAGAT CGACAGCCAC GGCTGGGCAG TTTGGCCACC GATCCGCTTT
AGTTACGACA CCATCAACTT CGCCACCGAG GTGCCCTTCC CCTCGCCCCC TTCACAGCAG
AATTTATTAG GTACCGACAG TAACGGCAGC GACGTGCTGG CCCGCGTGCT GTACGGCTTT
CGTATTTCGA TGCTGTTCGG GCTGGCGCTA ACGCTGTTTT CCAGCGTGAT TGGCGTCTGC
GCCGGTGCCA TGCAGGGCTA CTACGGCGGG CGCGTGGATC TATGGGGCCA GCGCTTTATT
GAAGTGTGGT CAGGGATGCC GACGCTGTTT TTGATTATTC TGCTGTCGAG CATCGTACAA
CCCAATTTTT GGTGGCTGCT CGGCATCACC ATTTTATTTG GCTGGATGAG TCTGGTGGGC
GTGGTACGCG CCGAGTTCCT GCGCACCCGT AACTACGATT ACATCCGCGC CGCACGTGCC
ATGGGGGTGC AGGACCGGGT CATTATGTAC CGGCATATGC TGCCCAATGC CATGGTGGCG
ATGCTGACCT TCTTGCCGTT TATCCTGTGC GGATCCATCA CCACCCTGAC CTCCCTCGAT
TTCCTGGGCT TTGGCCTGCC GATCGGTTCT CCGTCGCTCG GCGAGCTGCT GCTGCAGGGC
AAAAACAACC TGCAGGCGCC GTGGCTTGGC ATTACCGCGT TCCTGGTGTT GGCGGTGTTG
CTGTCTTTAC TTATTTTTAT TGGCGAAGCG GTACGCGACG CCTTTGACCC CAGCAAGGCG
CATTGA
|
|---|
| Protein sequence | MNRLSPINQA RWARFCSNRR GYWSLWIFLV LFILSLGANL IANDKPLLVR YEGRLYLPFI
IDYSETTFGG ELNTATDYQD PFVKKQIDSH GWAVWPPIRF SYDTINFATE VPFPSPPSQQ
NLLGTDSNGS DVLARVLYGF RISMLFGLAL TLFSSVIGVC AGAMQGYYGG RVDLWGQRFI
EVWSGMPTLF LIILLSSIVQ PNFWWLLGIT ILFGWMSLVG VVRAEFLRTR NYDYIRAARA
MGVQDRVIMY RHMLPNAMVA MLTFLPFILC GSITTLTSLD FLGFGLPIGS PSLGELLLQG
KNNLQAPWLG ITAFLVLAVL LSLLIFIGEA VRDAFDPSKA H
|
|---|
| |