Gene Spro_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3247 
Symbol 
ID5606572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3581253 
End bp3582347 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content56% 
IMG OID640938790 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001479473 
Protein GI157371484 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.559652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0140397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTT ATTTGATTCG CAGACTGTTG CTGATTATCC CCACCCTGTG GGCGATCATC 
ACCATTAACT TTTTTATTGT GCAGATCGCT CCCGGTGGCC CGGTCGACCA GGCGATTGCC
ACTATCGAAA TGGGCCAGAG CAGCGGCTTC GGCGGTGGCG GTGCCGGTGA AGGCCTGGGG
CACGCACGTA TTGGTGTTGG CAGTGCGACA GATAGCCAAT ACCGTGGCTC ACGCGGGCTG
GATCCCGAGG TGATCGCCGA GATCACCAAA CGCTATGGCT TCGACAAGCC GCTGCATGAG
CGCTATTTCA CCATGTTGTG GAACTACATG CGCCTCGACT TCGGTGACAG TCTGTTCCGT
GGCGCATCGG TGATGCAACT GGTGGGTCAT AGTCTGCCGG TATCAGTCAC GCTGGGGCTG
TGGAGCACGC TGATTATTTA CCTGGTGTCG ATCCCGTTGG GGATCCGCAA AGCGGTGCAT
AACGGCAGCG CCTTCGATAC CTGGAGCAGC ACTCTGATTA TCATTGGCTA TGCCATTCCG
GCCTTCCTGT TCGCGATTTT GATGATTGTG CTGTTCGCCG GTGGCAGCTA CCTCGACTGG
TTCCCGTTGC GCGGTCTGGT TTCCAGCAAT TTCGATACCC TGCCGTGGTA TGGCAAAATC
ACCGATTACC TGTGGCATAT CACGCTGCCG GTGCTGGCGA CGGTGATTGG TGGCTTCGCC
ACCCTGACCA TGCTGACCAA AAACTCATTC CTCGATGAGA TCCGCAAACA ATATGTGGTC
ACCGCACGTG CCAAAGGGCT GGACGAGAAC AAGATCCTTT ACCGCCACGT GTTCCGCAAC
GCCATGCTGC TGGTGATAGC CGGCTTTCCG GCGACCTTTG TCAGCATGTT TTTCACCGGC
TCATTGCTGA TCGAGGTGAT GTTCTCGCTC AACGGGCTGG GCTTGCTGGG TTATGACGCC
ACCCTGCAGC GCGATTACCC GGTGATGTTC GGCACGCTGT ATATCTTCAC CCTGATTGGC
CTGCTGTTGA ATATCCTTAG CGATATCACC TATACCCTGG TCGATCCGCG CATTGATTTC
GAGGCCCGCC AATGA
 
Protein sequence
MAAYLIRRLL LIIPTLWAII TINFFIVQIA PGGPVDQAIA TIEMGQSSGF GGGGAGEGLG 
HARIGVGSAT DSQYRGSRGL DPEVIAEITK RYGFDKPLHE RYFTMLWNYM RLDFGDSLFR
GASVMQLVGH SLPVSVTLGL WSTLIIYLVS IPLGIRKAVH NGSAFDTWSS TLIIIGYAIP
AFLFAILMIV LFAGGSYLDW FPLRGLVSSN FDTLPWYGKI TDYLWHITLP VLATVIGGFA
TLTMLTKNSF LDEIRKQYVV TARAKGLDEN KILYRHVFRN AMLLVIAGFP ATFVSMFFTG
SLLIEVMFSL NGLGLLGYDA TLQRDYPVMF GTLYIFTLIG LLLNILSDIT YTLVDPRIDF
EARQ