Gene Spro_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3230 
Symbol 
ID5606317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3561237 
End bp3562370 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID640938773 
Productbifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 
Protein accessionYP_001479456 
Protein GI157371467 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000411108 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCCAGT TGTCACCGCA AGATATTCAC CTGGGCGCAA CTGCCGGCAG CAAGCAGGCA 
GCCATCCAGC AGGTTGCCGC CGCACTGACC GAAGCCGGCT GCGTCAGCGC CGCCTACGTG
GACGGCATGC TGCAGCGCGA GCTGCAAACC TCCACCTATT TGGGTAACGG CATCGCCATC
CCGCACGGCA CTACCGATAC CCGTGAACTG GTGCTGAATA CCGGCGTACA GGTATTCCAG
TTCCCGCAGG GCATTGAGTG GGGCGAAGGC CAAACCGCCT TTGTGGTGAT CGGCATTGCC
GCCCGCTCCG ACGAACACCT TGCGCTGTTA CGCCAGCTGA CACACGTGCT GAGCGACGAC
AGCGTAGCCG AACAGTTGGC GAAAACCACC TCGACAGAAG AGCTGCGCAG CCTGCTGATG
GGCGAAAAGC TGACGGCAGA ATTCAAATTT GACGCTTCTC TGATCGCGAT CGATGTGGCC
GCCGACAGCC TGATGACGCT GCAGGCACTG AATGCCGGCC GTTTGCAGAA GATCGGTGCG
GTCAACGCCC AGTTCGTCAG CGACGTCATT ACCCGCAAGC CGCTGAATTT GGGGCAGGGT
ATTTGGCTGA GCGACAGCAC CGAAGGCAAT CTGACCAGCG CGGCCACTCT GAGCCGTCCG
GTGCAGGCGT TTGACGAAGA CGGCGAGAAA GTTGCGCTGC TGCTGACGCT GTCGGTGGCT
GACCAGCAAC CGCTGGCGGT GCTGAACTAC CTGAGTGACC TGCTGTTGGC AAATAAAGCT
GAACGCTTGC TGAACGCCGA TGCCATCACC GTGCTGGCAT TGCTGACCAG TGAGGTCGAA
GAAGAAAATA CCACCCTGAG TGCCGAGTAC GTCATTCGTA ACGAACACGG CCTGCATGCC
CGTCCGGGGA CGGCGCTGGT CAACGTAATC AAGAAGTTCG AGAGCGAAAT TACCGTCACC
AATCTGGATG GCAGTGGCAA ACCGGCCAAC GGACGCAGCC TGATGAAGGT CGTGGCGTTG
GGCGTGAAAA AAGGACATCA CCTGCGCTTT ACCGCCAAGG GTGAAGATGC TGAAACGGCG
CTGAAGGCGA TCGGTGAGGC CATTAACGAA GGACTGGGCG AGGGCGCAGC ATGA
 
Protein sequence
MFQLSPQDIH LGATAGSKQA AIQQVAAALT EAGCVSAAYV DGMLQRELQT STYLGNGIAI 
PHGTTDTREL VLNTGVQVFQ FPQGIEWGEG QTAFVVIGIA ARSDEHLALL RQLTHVLSDD
SVAEQLAKTT STEELRSLLM GEKLTAEFKF DASLIAIDVA ADSLMTLQAL NAGRLQKIGA
VNAQFVSDVI TRKPLNLGQG IWLSDSTEGN LTSAATLSRP VQAFDEDGEK VALLLTLSVA
DQQPLAVLNY LSDLLLANKA ERLLNADAIT VLALLTSEVE EENTTLSAEY VIRNEHGLHA
RPGTALVNVI KKFESEITVT NLDGSGKPAN GRSLMKVVAL GVKKGHHLRF TAKGEDAETA
LKAIGEAINE GLGEGAA