Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3230 |
Symbol | |
ID | 5606317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3561237 |
End bp | 3562370 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640938773 |
Product | bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
Protein accession | YP_001479456 |
Protein GI | 157371467 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000411108 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTTCCAGT TGTCACCGCA AGATATTCAC CTGGGCGCAA CTGCCGGCAG CAAGCAGGCA GCCATCCAGC AGGTTGCCGC CGCACTGACC GAAGCCGGCT GCGTCAGCGC CGCCTACGTG GACGGCATGC TGCAGCGCGA GCTGCAAACC TCCACCTATT TGGGTAACGG CATCGCCATC CCGCACGGCA CTACCGATAC CCGTGAACTG GTGCTGAATA CCGGCGTACA GGTATTCCAG TTCCCGCAGG GCATTGAGTG GGGCGAAGGC CAAACCGCCT TTGTGGTGAT CGGCATTGCC GCCCGCTCCG ACGAACACCT TGCGCTGTTA CGCCAGCTGA CACACGTGCT GAGCGACGAC AGCGTAGCCG AACAGTTGGC GAAAACCACC TCGACAGAAG AGCTGCGCAG CCTGCTGATG GGCGAAAAGC TGACGGCAGA ATTCAAATTT GACGCTTCTC TGATCGCGAT CGATGTGGCC GCCGACAGCC TGATGACGCT GCAGGCACTG AATGCCGGCC GTTTGCAGAA GATCGGTGCG GTCAACGCCC AGTTCGTCAG CGACGTCATT ACCCGCAAGC CGCTGAATTT GGGGCAGGGT ATTTGGCTGA GCGACAGCAC CGAAGGCAAT CTGACCAGCG CGGCCACTCT GAGCCGTCCG GTGCAGGCGT TTGACGAAGA CGGCGAGAAA GTTGCGCTGC TGCTGACGCT GTCGGTGGCT GACCAGCAAC CGCTGGCGGT GCTGAACTAC CTGAGTGACC TGCTGTTGGC AAATAAAGCT GAACGCTTGC TGAACGCCGA TGCCATCACC GTGCTGGCAT TGCTGACCAG TGAGGTCGAA GAAGAAAATA CCACCCTGAG TGCCGAGTAC GTCATTCGTA ACGAACACGG CCTGCATGCC CGTCCGGGGA CGGCGCTGGT CAACGTAATC AAGAAGTTCG AGAGCGAAAT TACCGTCACC AATCTGGATG GCAGTGGCAA ACCGGCCAAC GGACGCAGCC TGATGAAGGT CGTGGCGTTG GGCGTGAAAA AAGGACATCA CCTGCGCTTT ACCGCCAAGG GTGAAGATGC TGAAACGGCG CTGAAGGCGA TCGGTGAGGC CATTAACGAA GGACTGGGCG AGGGCGCAGC ATGA
|
Protein sequence | MFQLSPQDIH LGATAGSKQA AIQQVAAALT EAGCVSAAYV DGMLQRELQT STYLGNGIAI PHGTTDTREL VLNTGVQVFQ FPQGIEWGEG QTAFVVIGIA ARSDEHLALL RQLTHVLSDD SVAEQLAKTT STEELRSLLM GEKLTAEFKF DASLIAIDVA ADSLMTLQAL NAGRLQKIGA VNAQFVSDVI TRKPLNLGQG IWLSDSTEGN LTSAATLSRP VQAFDEDGEK VALLLTLSVA DQQPLAVLNY LSDLLLANKA ERLLNADAIT VLALLTSEVE EENTTLSAEY VIRNEHGLHA RPGTALVNVI KKFESEITVT NLDGSGKPAN GRSLMKVVAL GVKKGHHLRF TAKGEDAETA LKAIGEAINE GLGEGAA
|
| |