Gene Spro_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3225 
Symbol 
ID5606266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3555185 
End bp3556060 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content57% 
IMG OID640938768 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001479451 
Protein GI157371462 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000454466 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATATCA CCTTACGTCA ATTGGAAGTG TTTACCGAAG TTCTTAAGAG CGGTTCGACC 
ACGCAGGCTT CGGTAGTTCT GGCGTTATCA CAATCGGCGG TCAGCGCCGC GCTGGCCGAT
CTGGAAGGGC AATTGGGCGT GCAGTTGTTT GACCGCGTGG GCAAGCGTTT GGTCATTAAT
GAACATGGCA GGTTGCTGTA CCCGAAGGCG CTGGCACTGC TGGAGCAGGC GGGGGAGATT
GAACAACTGT TCCGCCATGA CGGCGGTGCA TTGCGCATCA GTGCCAGCAG CACCATCGGT
AACTATATGC TGCCGGAGAT GATCGCCCAT TATCGGCATG ATTTCCCCGC TTCACCGTTG
GAACTGAACG TCGGCAACAG CCAGGATGTG ATCGGCGCTG TGGCGGATTT CCGTGTCGAT
CTGGGACTGA TTGAAGGCCC TTGTCATATG CCGGAACTGA TCACTCTGCC TTGGCTGGAA
GATGAATTGG TGGTATTTGC CGCGCCGGAC AACCCGTTGG CCGGGCAACC ACTGACCCTG
GAAATGCTGG CCACAGCCCC CTGGATCCTG CGTGAGGGTG GATCGGGGAC GCGCGAGGTG
CTGCACCATC TGCTGCTGGC GCACTTGCCG CACTTCCAAC TGGTGATGGA ACTGGGTAAT
TCGGAAGCGA TCAAACATGC GGTTCGCCAT GGCATGGGGA TCAGTTGCCT GTCGCGGCGT
GTGATTGGCG AACAGTTGGC CAGTGGCGTG CTGGTGGAGC TGAATATCCC GTTACCGCCG
CTGATGCGCA CCCTTTATCT GATCCATCAC CGGCAAAAGC ATATCTCCAA CGCGCTGCAG
CGTTTTCTCG GATACTGTGG GTTTCAGCCT CAATAG
 
Protein sequence
MHITLRQLEV FTEVLKSGST TQASVVLALS QSAVSAALAD LEGQLGVQLF DRVGKRLVIN 
EHGRLLYPKA LALLEQAGEI EQLFRHDGGA LRISASSTIG NYMLPEMIAH YRHDFPASPL
ELNVGNSQDV IGAVADFRVD LGLIEGPCHM PELITLPWLE DELVVFAAPD NPLAGQPLTL
EMLATAPWIL REGGSGTREV LHHLLLAHLP HFQLVMELGN SEAIKHAVRH GMGISCLSRR
VIGEQLASGV LVELNIPLPP LMRTLYLIHH RQKHISNALQ RFLGYCGFQP Q