Gene Spro_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3197 
Symbol 
ID5605741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3521303 
End bp3522334 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content58% 
IMG OID640938739 
ProductLacI family transcription regulator 
Protein accessionYP_001479423 
Protein GI157371434 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGA AGAAACCCGG CGCGATCCCC GCGCCCACTG CACGCAAAGC GACGGCCAGT 
GATGTGGCGG CCCGCGCCGG CGTGTCCAAA TGGACGGTAT CGCGTGCCTT TACCGACGGT
GCGTCGATCT CACCCCATGC GAGGTTGCGC GTTCAAACCG CGGCCAGAGA ATTGGGTTAT
CGCCCTAATC TGCTGGCGCG CAGCCTGTCG AAAAAAAGCA CCCGCATCAT CGGGCTGGTG
GCGGACGAGC TAAAAAACCC GCATATTTTC ACGCTGCTGG ACGAAGTCAC CCGGCAGTTG
CAAAGCCGCG GCTATATGGC CTTGCTGCTG AATATCACCT CGGAACACGA CTATGAATCG
GTGCTGACGC TGGCCGATCA AATGCAGGTG GATGGCCTGC TGTTTCTCGG CACCCTGCTT
AACGATCGGC TGATCACGCT GGCACAGGAT ATTCACCATA TTCCACTGGT GGTGCTGTAT
CGCTATAGCG AAAGCCCCTA TATCCAGGTG TTGGCCACCA ACGGCTATCA GGCCGGGCGT
GAAATTGGCG AACTGTTGCT GACGCAAAAT TATCAGCGCA TGGGCTATCT GGCTGGGCCA
GTGAGTGAAT CCACCCAATT ACGCCGCCTT GACGGTTTCC GCGCCGCGCT GGCGGAAAAG
CAACGCGACG TCAGCGTGGT GCTGCAGGCC CCGCATTATC AACGTCAGTG CGGCATGGAA
GCCTTCGCGG CCTACCTGGC AACCACCCCG GCGGAACAAC GGGTTGAGGC GATTTTTTGT
GAGAACGATA TTCTGGCAGT GGGGGTTATC GACGCCATCC GCGCCACACC GGGCTGTGCG
CCGATTGCCG TGGTGGGGTT TGATGACATT GAACTGGCCG CCTCCCCCAG TTACCAGTTG
ACCACTTATC GCCAGCCGAT GCAGTCGCTG ATTGCCGATG GCATTCATTG CCTGACGCAG
GCTTTCGAAC CGGGCGGCCA ACGTTTATAT AACGGTGAAT TAATCGTCCG GCGGTCGCAT
ATTAAACAAT AA
 
Protein sequence
MMAKKPGAIP APTARKATAS DVAARAGVSK WTVSRAFTDG ASISPHARLR VQTAARELGY 
RPNLLARSLS KKSTRIIGLV ADELKNPHIF TLLDEVTRQL QSRGYMALLL NITSEHDYES
VLTLADQMQV DGLLFLGTLL NDRLITLAQD IHHIPLVVLY RYSESPYIQV LATNGYQAGR
EIGELLLTQN YQRMGYLAGP VSESTQLRRL DGFRAALAEK QRDVSVVLQA PHYQRQCGME
AFAAYLATTP AEQRVEAIFC ENDILAVGVI DAIRATPGCA PIAVVGFDDI ELAASPSYQL
TTYRQPMQSL IADGIHCLTQ AFEPGGQRLY NGELIVRRSH IKQ