Gene Spro_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3189 
Symbol 
ID5605656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3509401 
End bp3510849 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content52% 
IMG OID640938731 
Productamino acid permease-associated region 
Protein accessionYP_001479415 
Protein GI157371426 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAT CTGTGGAGAA TAAAACACAT CTAAAAAAAG CCATTACCTT CAATGGTTTC 
TTGGGGATGG GTATTGGCTG CGTGTTTGGT GCTTCCTGGT TGGTACTTAC CGGCACCTGG
CTAAGCACCG CCGGTGGCCC ATCCAATGCG GCACTGGCCA TTTTGCTCTG CCTTCTCATT
GAGCTTCCCC TGGCGCTGGC TTATCTGGAA GCCATCTCGG CGGTTCCGTT GGCAGGCGGA
GAGGCTGCGT ATTCTTACCT TGCCTTCGGT AGTTTTGCCG CGATGATTGC CGGATGGTTC
GGCGTGTTGG TTAATATCAT TTTATGCGCC TGGGAAGCGC TGGCGATCAC CACCATGCTG
GGCTACCTGC TGCCTTCCAT GAAGAGTGCG GCGATTCTCT ATGAGGTCGG CGGGTTTGCG
GTCAGTGCTC CATTATTGAT TATCGGGCTG TTACTTGTCG CAGGGATCGG CATGATGCAG
CATCGGGGGG TAAAACTTTC ATCAACGTTA CAGACGGTCA TTACAGTGAC TGTTTTAACC
CTGGTTATCG TCTCGCTGAT TGCATGTTCA TTCTATATCA ACCTTGAAAA TCTCAGCCCG
TTACAGAGCA AACCGACCTT TGCCGGCGTG GTGGCTCTGC TGGCGCTCCT GCCATTTTCT
ATTGCCGGAT GGGAAACCAT AGCCAAGGGG GCGGAAGAAG CCTCTGCCAG CCTAAGCCGT
AAAAAAACCG CTCTCGCTTT GATTATCTCT CTGGTCATTG CCACCTTTAT GTATCTGATT
ACCATGCTGG TTCCTTCGGC CATTGTGCCG TGGCAAAGCC TGATGACTAT GGATATCCCC
TTTGCTCATG CAGCAGAAAT AGTGACAGGT ACGCCAGTTT GGGGGTTGGT ATTAACGGCG
GCTGCTTGCT GCGGAGTCGT GGGTGTTTAT AACGCCTGTT TTTATGGTGC AACTCGTTTA
CTCATGTATA TGAGCCAGGT GGGTTTAATT CCGGCCGCTT TCTCCCGGTT GCACCCGGTT
TACCATACGC CAACGGTAGC CATCCTTTTC GTTTCATTAA TAGCCGCTTC TGCCTGTCTG
CTGGGTAAAG CCGTGTTTCT CCCACTGGTC ACCGTGGCCG CTTTTTCCTA TATCGTCTTG
TGGGGGTCAA CGCTGTTTTC CGTGATGCGA CTGCGGAAAT TGCGCCCTGA GCTTCCGCGC
CCACTTCCCA CTCCGGGAGG GAAATTCACC CTGGCTGTGG GGGCCATTGT GACTCTGCTT
ATGGCTGCGG CCATGTTGGT TCCTGGCAGC CCGGCGTCGC TTAAGTGGCC CTATGAGCAT
CTTCTATTGG GTGTGCTGCT GGTGATTGGC ATGATCCTCT ATTTGTTGCG GGATAAATCT
GTTTCCGGAG AAGAACAGGC CAAATTGATA CTGGAAAATA TTCCTACCGA AATAGTGAAA
AAAGACTGA
 
Protein sequence
MSQSVENKTH LKKAITFNGF LGMGIGCVFG ASWLVLTGTW LSTAGGPSNA ALAILLCLLI 
ELPLALAYLE AISAVPLAGG EAAYSYLAFG SFAAMIAGWF GVLVNIILCA WEALAITTML
GYLLPSMKSA AILYEVGGFA VSAPLLIIGL LLVAGIGMMQ HRGVKLSSTL QTVITVTVLT
LVIVSLIACS FYINLENLSP LQSKPTFAGV VALLALLPFS IAGWETIAKG AEEASASLSR
KKTALALIIS LVIATFMYLI TMLVPSAIVP WQSLMTMDIP FAHAAEIVTG TPVWGLVLTA
AACCGVVGVY NACFYGATRL LMYMSQVGLI PAAFSRLHPV YHTPTVAILF VSLIAASACL
LGKAVFLPLV TVAAFSYIVL WGSTLFSVMR LRKLRPELPR PLPTPGGKFT LAVGAIVTLL
MAAAMLVPGS PASLKWPYEH LLLGVLLVIG MILYLLRDKS VSGEEQAKLI LENIPTEIVK
KD