Gene Spro_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3169 
Symbol 
ID5605421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3487815 
End bp3488735 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID640938712 
Productcitrate lyase, beta subunit 
Protein accessionYP_001479397 
Protein GI157371408 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.386507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TGAATAAACA CCGCCTGCGT CGCAGCATGC TGTTCGTGCC CAGTGCCAAC 
GCGGCGATGG TAAGCAACGC TTTTATCTAT CAGGCCGATG CGCTGATGTT CGATCTGGAA
GACTCGGTGA TCCTGCGTGA GAAAGACGCG GCGCGGCGGC TGGTTTACCA CGCACTGCAA
CATCCGCTGT ATCAGGAAGT GGAAACCATT GTGCGGGTTA ACGCGCTGGA TTCCGCCTAC
GGTCTGGCAG ATTTGCAGGC GGTGGTGCGG GGCGGTGCGG ACATTGTGCG CCTGCCGAAA
ACCGACAGTG CGCAGGACGT GGTGGACATG GATCGCGAGA TTGCCGCCAT TGAAGCCGAC
TGCGGACGCC CGGTCGGCAG CACCGGCCTG CTGGCGGCGA TTGAGTCGGC GGCGGGTATT
ACCCAGGCGG TGGCGATTGC CCATGCCTCA CCACGGCTGA TCGGCATTGC GCTGGGAGCG
GAAGACTACG TGCGCAACCT GCGTACCGAG CGTTCTCCGG AAGGCATCGA ACTGTTGTTC
GCACGCTGTT CGTTGCTGCA GGCGGCGCGG GCGGCTGGCA TTCAGGCGTT CGACACGGTT
TATTCCGATG CCAATAACGA AGCCGGTTTC CTGCAGGAGG CGGCGCTGAT CAAACAGCTC
GGTTTCGACG GCAAATCCCT GATTAACCCC CGGCAGATCG AACTGCTGCA CAACTTGTAT
GCACCCACCG CCAAAGAGGT GGCCCATGCC CAGCGGGTGG TGGATGCCGC CGCAGCGGCG
GAGCAGGAGG GGCGCGGCGT GGTGTCGCTC AACGGCAAGA TGGTCGACAG CCCGGTGATT
GAACGCGCAC GGCTGGTGCT GCAGCGTGCA GCGCTTTCCG GCATCCGCGA AGCCTCGGTT
CAGCATGGAG AGGAAGCATA A
 
Protein sequence
MKTLNKHRLR RSMLFVPSAN AAMVSNAFIY QADALMFDLE DSVILREKDA ARRLVYHALQ 
HPLYQEVETI VRVNALDSAY GLADLQAVVR GGADIVRLPK TDSAQDVVDM DREIAAIEAD
CGRPVGSTGL LAAIESAAGI TQAVAIAHAS PRLIGIALGA EDYVRNLRTE RSPEGIELLF
ARCSLLQAAR AAGIQAFDTV YSDANNEAGF LQEAALIKQL GFDGKSLINP RQIELLHNLY
APTAKEVAHA QRVVDAAAAA EQEGRGVVSL NGKMVDSPVI ERARLVLQRA ALSGIREASV
QHGEEA