| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3154 |
|---|
| Symbol | |
|---|
| ID | 5605261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3472305 |
|---|
| End bp | 3473978 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640938697 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001479382 |
|---|
| Protein GI | 157371393 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTC AGACGGCATT ACAACGGGCG GCGGCCACGC CGGTGCTGGA GCTGGAGCAG
GTGTCGATAG CCTATCAGGG GGCAACCGGC AGCCAACGGG TGGTGCATCA GGTATCCTTC
GCCATTCAAC CGGGGGAAGT GGTGGCGCTG GTCGGTGAGT CCGGTTCGGG GAAAACCACT
ACCGCGCAGG CGATCATTGG CCTGCTGACG GAAAACGGCC GTCTGGAGCA GGGCGCCATC
CGTCTCAACG GCACCGATAT CAGCCACTGG TCTTCCCGAC GGCTGGACGC GGTGCGCGGC
GCGCAAATCA GTTTGATCCC ACAGGATCCG TCCAGCTCGC TCAATCCGGT GAAAACCATT
GGCGAACAGG TGGCGGAGAT CCTCAATATT CATCACAGGT TACCGCGTAA GCAGGTGCAA
CAGCGGGTGG TGGCTCTGTT GACCCGCGTA GGTCTGACGC ACCCGGAGCT GCGGGCTCGT
CAGTATCCAC ATGAGCTTTC CGGTGGCATG AAACAACGGG TGTTGATCGC TATTGCTATC
GCGCTGCAAC CGGCGCTGAT TATCGCCGAT GAGCCGACCA GCGCGCTGGA TGTCACGGTG
CAAAAGCGCA TTCTCGATCT GATCGACGAG TTGCGACAGG AGTTTGGTAC CGCGGTGCTG
CTGGTGACCC ACGACCTGGC GGTGGCGGCA GAGCGTGCCG ACCGGCTGCT GGTGTTTCGC
CATGGCCGGG TGCAGGAGCA GGGCGTGACC GCCGAAGTGC TGCGTGCACC TACCAGTGAC
TACACCCGCC GGCTGTTTGC TGACGTGCCG TCGTTGACCC GTGCGGCTGT GCCAAAACCT
AGCGAGGGCT TGCAAGAGTT GGCGATCCAG GTGAATGGGC TGGTGAAAGA TTTCCGCCTG
GCTGGTGTCG GGGGAAAAAC TTACCGCGCG CTGGATCAGG TGTCGTTCAG CGTGCCGCGC
GGCACCACCC ATGCGCTGGT GGGGGAGTCT GGTTCCGGCA AGACCACTTT GGCGCGCTGC
CTGCTCGGTT TCCAACGGCC GGATGCCGGA CAAATCATCA TCGACGGCGT CGACTTCACT
CAGTTGAAGG GCGAGGCGCT GCGGCAGTTC CGTCGCCGTA TTCAGTTGGT GTACCAGAAC
CCGTTCGGCT CGCTTGACCC GTCGCAGACG CTGTATCAGG TGATTGAAGA GCCGTTGCTG
AACTTTGAGC CGCTGGGCAA AGCCGAGCGC TATCGCCGGG TACGTGAGCT GTTTGAACGG
GTGGCGCTGC CGGACGAGCT GCTGAGCCGT AAACCCCGCG AACTGTCTGG TGGCCAGCGC
CAACGGGTGG CGATCGCCCG GGCGCTGGTG TTGCAGCCAC GGGTACTGGT ATTGGACGAA
GCGACCTCGG CATTGGACGT TACGGTACAG GCGCAGATCC TGCGGCTGTT GCAGGATTTG
CAGCAGGAAC TGGGGCTGAG CTATTTGTTT ATCTCACACG ATCTGGCCAC GGTGCGGCAG
ATTTCACACA GCGTTTCGGT ATTGCACCGG GGGATACAGG TGGACAGCGG CGCGACCGGC
GAGCTGTTCG CCATGCCGGG CAGCGATTAC ACCCGTCAGT TGATTGAGGC CATTCCCGGC
CGTCAGTTTT ATGCCGAACA GCCCAAGAGT GAGGACGTAT TCTATGAGCA GTAA
|
|---|
| Protein sequence | MSIQTALQRA AATPVLELEQ VSIAYQGATG SQRVVHQVSF AIQPGEVVAL VGESGSGKTT
TAQAIIGLLT ENGRLEQGAI RLNGTDISHW SSRRLDAVRG AQISLIPQDP SSSLNPVKTI
GEQVAEILNI HHRLPRKQVQ QRVVALLTRV GLTHPELRAR QYPHELSGGM KQRVLIAIAI
ALQPALIIAD EPTSALDVTV QKRILDLIDE LRQEFGTAVL LVTHDLAVAA ERADRLLVFR
HGRVQEQGVT AEVLRAPTSD YTRRLFADVP SLTRAAVPKP SEGLQELAIQ VNGLVKDFRL
AGVGGKTYRA LDQVSFSVPR GTTHALVGES GSGKTTLARC LLGFQRPDAG QIIIDGVDFT
QLKGEALRQF RRRIQLVYQN PFGSLDPSQT LYQVIEEPLL NFEPLGKAER YRRVRELFER
VALPDELLSR KPRELSGGQR QRVAIARALV LQPRVLVLDE ATSALDVTVQ AQILRLLQDL
QQELGLSYLF ISHDLATVRQ ISHSVSVLHR GIQVDSGATG ELFAMPGSDY TRQLIEAIPG
RQFYAEQPKS EDVFYEQ
|
|---|
| |