Gene Spro_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3139 
Symbol 
ID5605047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3454798 
End bp3457887 
Gene Length3090 bp 
Protein Length1029 aa 
Translation table11 
GC content56% 
IMG OID640938682 
Productacriflavin resistance protein 
Protein accessionYP_001479367 
Protein GI157371378 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.856751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG GTCGATTCAA TCTTTCAGCG CTTGCCGTTC GTGAGCGCTC GATCACACTG 
TTCCTTATTA TTCTGATCAC GGTCGCGGGT ATTCTCTCGT TTTTCGAACT GGGGCGGGCT
GAAGATCCCC CCTTTACCGT TAAGCAGATG ACGATTATTA CTGCCTGGCC GGGTGCCACC
GCGCAGGAGA TGCAGGATCA GGTTGCCGAA CCGCTTGAAA AGCGTATGCA GGAGCTGAAG
TGGTATGACC GTAGTGAGAC CTACACGCGT CCCGGTCTGG CCTTTACCAT GCTGTCACTG
CAGGACCGCA CACCGCCTGC ACAGGTGCAG GAAGAATTTT ATCAGGCGCG CAAGAAGCTC
GGTGATGAGG TTAAAAACCT GCCGGCAGGT GTGATAGGGC CGATGATCAA TGATGAATTC
TCCGACGTAA CCTTTGCCCT CTTTGCGCTG AAGGCGAAAG GGGAGCCACA GCGACTGCTG
GTGCGCGATG CGGAATCTTT GCGTCAGCGT CTTTTACATG TGCCGGGGGT CAAGAAGGTC
AATATCATCG GCGAACAGGC CGAACGCATC TTTGTCTCGT TCTCGCATGA CCGGCTGGCC
ACGCTGGGCA TTTCTCCACA GGATATTTTC TCCGCCCTCA ACAGCCAGAA CGTACTGACG
CCCGCAGGTT CGATTGACAC CAAAGGGCCG CAGGTCTTTA TCCGCCTTGA CGGTGCCTTC
GACGAACTGG AGAAAATCCG CGAAACGCCC ATTGTTGTAC AGGGCAGAAC CCTACAGCTT
TCTGACGTGG CAACGGTTGA GCGTGGTTAT GAAGACCCTG CAACCTTCTT GATCCGCAAC
CAGAGTGAAC CGGCGCTGCT GCTGGGGATC GTTATGCGTG ACGGCTGGAA CGGCCTGGAT
CTGGGGAAGG CGCTGGATGC GGAAACCGCC AAAATTAATG AGGGCATGCC GCTCGGCATG
AACCTGACGA AGATCACCGA TCAATCAGTC AACATCAGCT CCGCCGTTGA CGAGTTTATG
ATCAAGTTCT TTGTCGCGCT GCTGGTGGTC ATGGTGGTGT GCTTCGTCAG TATGGGATGG
CGCGTGGGCG TGGTGGTCGC CGCTGCCGTG CCCTTGACGC TGGCTATCGT TTTTGTGGTG
ATGGAGGCTT CCGGCAAAAA CTTTGACCGC ATTACCCTGG GGTCGCTGAT CCTGGCGCTC
GGGTTGCTGG TGGATGATGC CATCATCGCC ATCGAAATGA TGGTGGTAAA AATGGAAGAG
GGCTACGACC GCATCAAAGC CTCGGCCTAT GCCTGGAGCC ACACGGCGGC TCCGATGCTG
GCGGGCACGC TGGTCACCGC CGTCGGTTTC ATGCCCAACG GGTTTGCCCA GTCCACCGCC
GGCGAGTACA CCAGCAACAT GTTTTGGATT GTGGGGATTG CCCTGATTGC TTCCTGGGTC
GTGGCGGTGG TGTTTACGCC TTATCTGGGG GTGAAAATGC TACCGAAAAT CAAAACGGTG
GAGGGAGGAC ATGCGGCGAT TTACGACACC CGCCATTACA ACCGTTTTCG CCGGGTACTA
ACCCGCGTTA TCGCGCGAAA ATGGATAGTG GCCGCTACCG TTATTGCCGT CTTTATTGTC
GCTATTCTCG GTATGGGGCT GGTGAAAAAA CAGTTTTTCC CCACTTCCGA TCGGCCTGAG
GTATTGGTTG AAGTCCAGAT GCCTTATGGC ACCGCCATTG AGCAGACCAG CGCCACAACG
GTGAAAATTG AAGCCTGGCT GAAAAAGCAG AAAGAGGCAA AAATCATTAC GGCCTATATC
GGGCAGGGGT CGCCGCGCTT TTATCTGGCC ATGGCACCAG AACTGCCCGA TCCGTCGTTT
GCGAAGATTG TCGTGCTGAC GGACAGTCAG GAAGCGCGTG AGGCGCTCAA ATTCAGACTG
CGTGAAGCAG TGGCCAGCGG CCTGGCGCCT GAAGCGCGCG TGCGCGTGAC TCAACTGGTG
TTTGGTCCGT ATTCACCTTA TCCGGTGGCT TACCGAGTCA TGGGGCCGGA TCCCACCAAA
CTGCGCGAAA TTGCAGACGA GGTAGAAAGG GTGATGCAGG CCAGCCCGAT AATGAGGACC
GTCAACACCG ACTGGGGACC GCGGGTGCCG GCGCTGCATT TCACGCTCAA TCAGGACCGC
CTGCAGGCGG TAGGGTTGAC ATCGAACGCG GTTGCCCAGC AGCTTCAATT CCTGCTTTCA
GGGGTTCCGA TCACCTTTGT GCGTGAAGAT ATCCGTTCGG TGCAGGTCAT GGGACGCGCG
GCGGGAGATA TCCGGCTTGA TCCGGCAAAA ATAGCCGGTT TTACCTTAGT GGGCTCTTCC
GGCCAGCGCA TTCCGCTATC TCAGATAGGC AAGGTTGAAG TGCAAATGGA AGATCCTGTT
CTGCGTCGTC GCGATCGCAC CCCGACGATT ACCGTGCGGG GGGACATTGC CGAAAATCTG
CAACCGCCGG ATGTCTCCAC AGCAATCATC AAGGCGTTGC AGCCGGTCAT CAATCAACTT
CCGACGGGTT ACCGCATTGA ACAGGCTGGT TCGATTGAAG AATCCGGCAA AGCCACCCAG
GCTATGGCTC CGCTGTTCCC TATCATGATT GCCATGACGC TGTTGATTAT TATTCTGCAG
GTGCGGTCGA TGTCGGCGAT GGTAATGGTA TTCCTCACCG CGCCACTGGG ACTGATTGGG
GTAGTGCCAA CACTGCTGCT CTTCAACCAG CCGTTTGGCA TCAATGCGCT GGTAGGATTA
ATCGCGTTAT CGGGGATCCT GATGCGTAAC ACCCTGATCC TGATAGGGCA GATCCATCAT
AACGAACAGA AAGGGCTGGC ACCATTCCAT GCCGTTGTGG AGGCGACGGT GCAGCGAGCC
AGGCCGGTGT TGCTCACGGC AATGGCCGCC ATCCTGGCGT TTATCCCGCT GACGCATTCG
GTGTTCTGGG GAACGCTGGC CTATACCCTG ATTGGCGGAA CCTTTGGCGG CACCATCATC
ACGCTGGTCT TTCTGCCGGC AATGTATGCC ATCTGGTTCA GGATACGGCC TGACAATCAG
CCGCAGAGTG AAAGGCCTGC ATCCGCCTAG
 
Protein sequence
MSAGRFNLSA LAVRERSITL FLIILITVAG ILSFFELGRA EDPPFTVKQM TIITAWPGAT 
AQEMQDQVAE PLEKRMQELK WYDRSETYTR PGLAFTMLSL QDRTPPAQVQ EEFYQARKKL
GDEVKNLPAG VIGPMINDEF SDVTFALFAL KAKGEPQRLL VRDAESLRQR LLHVPGVKKV
NIIGEQAERI FVSFSHDRLA TLGISPQDIF SALNSQNVLT PAGSIDTKGP QVFIRLDGAF
DELEKIRETP IVVQGRTLQL SDVATVERGY EDPATFLIRN QSEPALLLGI VMRDGWNGLD
LGKALDAETA KINEGMPLGM NLTKITDQSV NISSAVDEFM IKFFVALLVV MVVCFVSMGW
RVGVVVAAAV PLTLAIVFVV MEASGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE
GYDRIKASAY AWSHTAAPML AGTLVTAVGF MPNGFAQSTA GEYTSNMFWI VGIALIASWV
VAVVFTPYLG VKMLPKIKTV EGGHAAIYDT RHYNRFRRVL TRVIARKWIV AATVIAVFIV
AILGMGLVKK QFFPTSDRPE VLVEVQMPYG TAIEQTSATT VKIEAWLKKQ KEAKIITAYI
GQGSPRFYLA MAPELPDPSF AKIVVLTDSQ EAREALKFRL REAVASGLAP EARVRVTQLV
FGPYSPYPVA YRVMGPDPTK LREIADEVER VMQASPIMRT VNTDWGPRVP ALHFTLNQDR
LQAVGLTSNA VAQQLQFLLS GVPITFVRED IRSVQVMGRA AGDIRLDPAK IAGFTLVGSS
GQRIPLSQIG KVEVQMEDPV LRRRDRTPTI TVRGDIAENL QPPDVSTAII KALQPVINQL
PTGYRIEQAG SIEESGKATQ AMAPLFPIMI AMTLLIIILQ VRSMSAMVMV FLTAPLGLIG
VVPTLLLFNQ PFGINALVGL IALSGILMRN TLILIGQIHH NEQKGLAPFH AVVEATVQRA
RPVLLTAMAA ILAFIPLTHS VFWGTLAYTL IGGTFGGTII TLVFLPAMYA IWFRIRPDNQ
PQSERPASA