Gene Spro_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3114 
Symbol 
ID5604603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3427199 
End bp3428251 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content60% 
IMG OID640938656 
ProductLacI family transcription regulator 
Protein accessionYP_001479342 
Protein GI157371353 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0116195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA AGATGGCGGT GGACAAGGCG ATGATCAGTG CGAAAGACGT GGCGGAATTG 
GCTGGAGTTT CCCGATCGGC GGTCTCGCGG ACTTATACGT CTGGTGCCAG CGTGTCGGCG
GCGACCCGCG AGAAGGTGAT GCGGGCGGCT GAAGAACTGG GATATCACGT TAACCATTTG
GCTCGGGGAT TGGTACGTAA CCGCAGCGGC ATTGTTTGCC TGATCGTTTC AGAGTTGGCG
ACCCCTTACC GGGCCAGCCT GGTGCGCTTG CTGACCCAGC ATTTGCAGGA CGCGGGCAAA
ATAGCCATGT TGATTAACAC CGATCGCTCC GATGACAGCG TCTCCCAGGC GCTGCAACAG
GCAATAAACT TTCGGGCGGA TGCCTCCTTT GTACTATCCG GCATGCCCGA CAGCGCCATT
GCCCGCCTGT GTCACAGGCA CGGCCAGCGG CTGGTGCTGA TTAACCGTGA TGACACCTTG
CCCGGCTCAC TCAGCATCCG GCTGGATAAC GAAGAAGCGG CGGGCAGAGT GGTGATGGCG
TTCGCCCGTG CGGGCTGCCA ACGCATCGCT TTTGCCAACT CTTTGGCCGG TACGCCCAGC
CTGATGGCGC GTGAACGGGG TTTTCTGCAG GCAGCGGAAG CGGCGGGGTT ACCGGTGAGC
GTCGAACGCT TCGGTACCAC CTCCTATGAG AGCGGTCAGA TCCTGGCGCA CCGCCTGTTG
ACCCGGCGCG AGCGGCCTGA TGCGGTGTTC TGCGTCACGG ATTTATTGGC CTGCGGCTTT
ATGGACGAGG CGCGCCATCG TTTTGGGCTG CGTATTCCTG AAGAACTTTG TGTTGCGGGC
TACGACGATA TTCCGCAGGC GGCCTGGTCT TCTTACCATC TCACCACTTT TACCCAGCCG
GTGGCGATAT TTGCTCAGGA TTCGGTTGCG TGGCTGGTGG CCGAAGAGAA GAAAGAAGAG
AGCATGATGC CGGCACTGGG GCAGGAGATG CCGGGTGAAA CCCGGCTGTA CCATGCTGAT
TTTGTCTGGC GTGGCACCAT TCGCGGGGCC TGA
 
Protein sequence
MDMKMAVDKA MISAKDVAEL AGVSRSAVSR TYTSGASVSA ATREKVMRAA EELGYHVNHL 
ARGLVRNRSG IVCLIVSELA TPYRASLVRL LTQHLQDAGK IAMLINTDRS DDSVSQALQQ
AINFRADASF VLSGMPDSAI ARLCHRHGQR LVLINRDDTL PGSLSIRLDN EEAAGRVVMA
FARAGCQRIA FANSLAGTPS LMARERGFLQ AAEAAGLPVS VERFGTTSYE SGQILAHRLL
TRRERPDAVF CVTDLLACGF MDEARHRFGL RIPEELCVAG YDDIPQAAWS SYHLTTFTQP
VAIFAQDSVA WLVAEEKKEE SMMPALGQEM PGETRLYHAD FVWRGTIRGA