| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3108 |
|---|
| Symbol | |
|---|
| ID | 5604558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3419825 |
|---|
| End bp | 3420511 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640938648 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001479336 |
|---|
| Protein GI | 157371347 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.390914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGATTTCCGG TACTGCACTG GCACTCTCGA TGGCCACCTC CAGCCTGGGT
TTTGCCGATG ATAAGCAAAG GGCGCCTACC ATTCGCACCA TGAGCGGCGC GCAGGCAAGT
ACATCTTTAC CGGCTAACGC TACAGCGCTA TTGGTGATTG ATTTTCAGAA TGAATACTTC
GTCGGCAAGA TGCCCATCCC CGACGGAAAT AAAGCGCTGA TGAACACGCA ACGGTTGGTC
AGTTTTGCCC ATCAGCACAA GATGCCGGTG TTTTTTATTC GACATATTGG CCCGGCAAAT
GGGCCGTTGT TTGCCGAAGG TAGCAAGTTC GCCGAGTTCC ATCCGGATCT GCAGCCGTCC
GGCATTGATC GGGTGATCAC CAAAGCCACC CCCAGTTCAT TTGTGGGCAC CGATCTGGAT
AAGCAACTTA AGCAGGCGGG TATCAAGAAG CTGGTAGTGA GTGGGTTGAT GACCCATATG
TGCGTCTCTT CAACGGCGCG CGATGCGGTG CCGTTGGGCT ATGAGGTGAT TATTCCCGAG
GATGCCACCG CCACCCGCGA TCTGGCTACC TGGGATAACC AAATTGTGAG TCACGCCGTG
CTGCAACGCG CTGCGCTGGC CGGGGTAGCC GATGTGTTTG CTGAAATCAA AACCACCGAT
CAGGTCTTGG CGCTGCCGGT GAATTAA
|
|---|
| Protein sequence | MKKLISGTAL ALSMATSSLG FADDKQRAPT IRTMSGAQAS TSLPANATAL LVIDFQNEYF
VGKMPIPDGN KALMNTQRLV SFAHQHKMPV FFIRHIGPAN GPLFAEGSKF AEFHPDLQPS
GIDRVITKAT PSSFVGTDLD KQLKQAGIKK LVVSGLMTHM CVSSTARDAV PLGYEVIIPE
DATATRDLAT WDNQIVSHAV LQRAALAGVA DVFAEIKTTD QVLALPVN
|
|---|
| |