Gene Spro_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3106 
Symbol 
ID5604556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3417742 
End bp3419196 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content57% 
IMG OID640938646 
Producthypothetical protein 
Protein accessionYP_001479334 
Protein GI157371345 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.20256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCAT ATACCGCCTT GCGTCAGCGA GTAGAAAATA CCCCCTGGTA CCCAAAACGC 
AAAAGTTATC GCGTCCTGTT TTGGCGTGAA ATCACGCCGC TGGCGGTGCC GATCTTTATG
GAGAACGCCT GCGTTCTGCT GATGGGAGTG CTGAGCACCT TTCTGGTGAG CTGGATCGGT
AAAGAGGCGA TGGCCGGGGT CGGGCTGGCG GACAGCTTCA ACATGGTGAT TATCTCCTTC
TTTGCCGCCG TGGATCTGGG CACCACGGTG GTGGTGGCCT TCAGCCTGGG CAAGCGCGAT
CGCAAAAGAG CACGCTCGGC GGCACGCCAG TCGCTGGTGT TGATGACGCT GGTGGCGCTG
GTGCTGGCGG TGGGCATCCA TTTGGCCGGC GAGCAGATTA TTGATGTGAT CGCCGGTGCT
GCCACGCCGC AGGTGAAAGC ATTGGCGCTT TCTTATTTGC AAACAACGGT CTGGAGCTAT
CCGGCGGCGG CCATTGCGCT GATTGGCAGC GGTGCGTTGC GCGGAGCCGG GAACACCAAG
ATCCCGCTGC TGATCAACGG CGGCATGAAT ATCCTGAATA TCATCATCAG CAGCATCCTG
ATTTATGGCA TGTTGGGTTG GCATGGGTTG GGCTTTGTCG GTGCCGGATT GGGGCTGACC
ATTTCCCGCT ATATTGGCGC GATAGCGATT ATCTACGTGC TGATGATCGG TTTTAACCCG
GCGTTGCATA TCACGCTGAA AAGTTACTTT AGCCCATTGA AGCTGGCCAT CTTGTGGGAA
GTGTTGGGGA TTGGCATCCC CGCCAGCATT GAGTCGGTGT TGTTCAACGG CGGTAAGTTG
CTGACCCAAA TGTTTGTCGC CGGTATGGGT ACCAACGTTA TCGCCGGTAA TTTTATCGCT
TTCTCTGTCG CTTCATTGAT CAACCTGCCG GGCAACGCCT TGGGGTCTGC ATCGACCATT
ATTGTCGGGA AACGTCTGGG TAAAGGGCAG ATAGCCCAGG CGGAACGGCA GTTGCGGCAC
ATCTTCTGGC TGGCGACGAT TGGACTGACG GTGATCGCCT GGGGCACGGC ACCGCTGGCG
GGAATGTTCG CCTCGTTTTA TACGCAACAA GATGATGTGA AGGAGGTGGT GAAGGTGCTG
CTCTGGCTCA ACGCCGCCTT TATGCCCATT TGGGCCGCTT CCTGGGTGCT GCCCGCCGGT
TTGAAAGGCG CGCGCGACGC TCGTTTCGCC ATGTGGGTGT CGATGCTGGG CATGTGGGGT
TGTCGCGTGG TGGCCGGCTA TACGCTGGGC ATTGTGCTGG GGATGGGCGT GGTCGGCGTC
TGGTTAGGGA TGTTTATGGA TTGGGCGGTG CGCGGTGCGT TGTTTTATTG GCGTATGGTC
AGCGGACGTT GGCTGTGGAA ATATCCGCGG CTAAAACAGC CTGATGTGGC GGAAAAACAA
CCATCCGATA TCTGA
 
Protein sequence
MKPYTALRQR VENTPWYPKR KSYRVLFWRE ITPLAVPIFM ENACVLLMGV LSTFLVSWIG 
KEAMAGVGLA DSFNMVIISF FAAVDLGTTV VVAFSLGKRD RKRARSAARQ SLVLMTLVAL
VLAVGIHLAG EQIIDVIAGA ATPQVKALAL SYLQTTVWSY PAAAIALIGS GALRGAGNTK
IPLLINGGMN ILNIIISSIL IYGMLGWHGL GFVGAGLGLT ISRYIGAIAI IYVLMIGFNP
ALHITLKSYF SPLKLAILWE VLGIGIPASI ESVLFNGGKL LTQMFVAGMG TNVIAGNFIA
FSVASLINLP GNALGSASTI IVGKRLGKGQ IAQAERQLRH IFWLATIGLT VIAWGTAPLA
GMFASFYTQQ DDVKEVVKVL LWLNAAFMPI WAASWVLPAG LKGARDARFA MWVSMLGMWG
CRVVAGYTLG IVLGMGVVGV WLGMFMDWAV RGALFYWRMV SGRWLWKYPR LKQPDVAEKQ
PSDI