Gene Spro_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3104 
Symbol 
ID5604554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3415694 
End bp3416542 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content53% 
IMG OID640938644 
ProductAraC family transcriptional regulator 
Protein accessionYP_001479332 
Protein GI157371343 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.187437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGA GTTTCACCCT AAACCGCACC GACAATATTG AGCTGAATCT GTACCAATAT 
GGTGAGGAGA ACTGCGACAA AGGGCACAGC TTCGGCCCGG CGGTGCGGCA GCACTATCTA
TTTCATTATG TGATAAGCGG AACCGGCGTA CTGCACAGCG AATACGGTGC ATTTCCAGTC
GTTGCTGGTG AAGGTTTTTT GATCCATCCG CACGACGTAA CCACCTATCG CGCCGATAAA
AAAGATCCCT GGCATTACAT GTGGCTGGAG GTCGACGGAC TGGTGGCCGG CAAGATTTTC
GAAGAGTGCC GCCTGAGCCG CCAGTTCCCG ATTTATCGCC CCCGCAAGAC TGACGAGACT
CCTCAGGCCC TGAGCTACCT GCGACAGCTC GTTAGCCATG ATGATGAACA TCGATTGAAG
ACCCTCGGCC TGAGCTATCT GTTTTTTTCT GCGTTGATCG ACAATGCGCT ACAGGGCAGC
GATGAACACC CCAGCGACAA GACGCAACAT CTGCACAAAG CGGTCAAACT GATTGAAAAC
CGTTACCACG AACACCTGAC CATTGAGCGC CTGGCCGCCT ACTGCAATAT CAACCGCAGT
TACCTGTGCC GATTGTTCAA GGGGGCTTAC GGTATCGGGC CAAAGGAGTA CTTGCTTAAC
TTTCGCATGA CGCTCGCCAC CAGCCTGCTG CGTAACAGCC GGACGGCGAT AAAAGTGGTG
GGGATCTCGG TCGGCTATGA AAACCAACTG CATTTTTCCA AAGCCTTCAA ACAGGTCCAC
GGCGTATCAC CGGCCCAATG GCGGCAGGAA AATCAACCGG ACAACGCCTC GCCTTGCCAC
AAAGGTTAA
 
Protein sequence
MHKSFTLNRT DNIELNLYQY GEENCDKGHS FGPAVRQHYL FHYVISGTGV LHSEYGAFPV 
VAGEGFLIHP HDVTTYRADK KDPWHYMWLE VDGLVAGKIF EECRLSRQFP IYRPRKTDET
PQALSYLRQL VSHDDEHRLK TLGLSYLFFS ALIDNALQGS DEHPSDKTQH LHKAVKLIEN
RYHEHLTIER LAAYCNINRS YLCRLFKGAY GIGPKEYLLN FRMTLATSLL RNSRTAIKVV
GISVGYENQL HFSKAFKQVH GVSPAQWRQE NQPDNASPCH KG