Gene Spro_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3102 
Symbol 
ID5604530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3412849 
End bp3414105 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content52% 
IMG OID640938642 
Productmajor facilitator superfamily oligosaccharide/H+ symporter 
Protein accessionYP_001479330 
Protein GI157371341 
COG category 
COG ID 
TIGRFAM ID[TIGR00882] oligosaccharide:H+ symporter 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.186561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATT TAAAGAACAA GAACTTTTGG ATCTTCGGTG CCTTCTGTTT TTTCTATTTC 
TTTATCATGG GGGCGGTGCT GCCGTTCTTC CCGATCTGGT TGCATGACGT CAACCAACTC
GACCAGCAAC AAACCGGTCT GGTATTCGCC TGCATGGCGC TGTTTGCGTT GGTGTTCCAG
CCGATTTTTG GTTTTGTCAC CGACAAATTT GGCCTGAAGA AACACCTGTT GTGGATGATC
ATTTTCCTGC TGCTGTTTCT GGCACCGCTG TTTATTTATG TCTTCTCGCC GCTGCTGCAA
ACCAACTTTG TGCTCGGGGC GCTATTGTGC GGGATTTACC TGGGGTTGGT GTGCAGCGGA
GGCTCGCCGG CAATTGAAGC CTATATCGAG AAGGTGAGCC GCCGCAGCCA GTTTGAGTAT
GGTCGTGCCC GGCTGTTTGG CTGTATCGGC TGGGCGATTT GCGCGTCGAT CGTTGGCTAT
ATGTTTACCA TCAACAACCA GTTTGCGTTT TGGCTGGCGT CGAGCTTTGC ACTGGTGTTG
GCCGGCCTGC TTTATATGTT CAAACCTGAG CAAAACAACA CGCTGGCGGT GGCGGACGGC
TTGGCGCTGA ACCACAAACC GGTCAAGTTG AAAGCGGCGT TGAGCCTGCT GAAAATGCGC
AAATTTTGGT GCCTGGTGAT GTATATCGTC GGGGTGGCCT GCGTGTACGA CGTGTTCGAT
CAGCAGTTCG CCAACTTCTT CACTTCGTTT TTCAGCGACC GACATGCCGG GACTCAGGCG
TTTGGCTATG TCACCACGCT GGGCGAGTTC CTCAACGCTT TTATCATGTT CTTTGCGCCA
TTGATCATCA ACCGCATTGG CGGCAAGAAC GCGCTGCTGA TTGCCGGGGT GATTATGTCG
GTGCGGATTA TCGGTTCGTC TCAGGCTGAC TCGGTGACTG CGGTGATTTT CCTCAAAACC
CTGCATATGT TTGAGGTGCC GTTCCTGCTG GTGGGCATTT TCAAATACAT CACCACCCAG
TTTAATGTGA ATCTTTCCGC ATCGATTTAC CTGTGGGGTT TCTGCTTCTT CAAGCAGCTA
TCGGCTATCG GCATGTCCTA TGCGGCGGGC CTGATGTACG TCAACTACGG CTTTAAAACC
TCGTATCTGA TCCTCGGCTG CATTGCCTTG CTGTTTACCC TGATCTCGGC CTTTGCCCTG
AGCGGCAAGG TCGCGGTGGT AAAACAGGAG GCTGTGCTGC CGGTGGCGGC GAATTAA
 
Protein sequence
MFYLKNKNFW IFGAFCFFYF FIMGAVLPFF PIWLHDVNQL DQQQTGLVFA CMALFALVFQ 
PIFGFVTDKF GLKKHLLWMI IFLLLFLAPL FIYVFSPLLQ TNFVLGALLC GIYLGLVCSG
GSPAIEAYIE KVSRRSQFEY GRARLFGCIG WAICASIVGY MFTINNQFAF WLASSFALVL
AGLLYMFKPE QNNTLAVADG LALNHKPVKL KAALSLLKMR KFWCLVMYIV GVACVYDVFD
QQFANFFTSF FSDRHAGTQA FGYVTTLGEF LNAFIMFFAP LIINRIGGKN ALLIAGVIMS
VRIIGSSQAD SVTAVIFLKT LHMFEVPFLL VGIFKYITTQ FNVNLSASIY LWGFCFFKQL
SAIGMSYAAG LMYVNYGFKT SYLILGCIAL LFTLISAFAL SGKVAVVKQE AVLPVAAN