Gene Spro_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3088 
Symbol 
ID5604371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3398346 
End bp3399533 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content58% 
IMG OID640938628 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001479316 
Protein GI157371327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.117971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATC ACATTGGCCG TTCGGCGGCC GATCCTATTA TGTCGTTGAT GGAAGCTTAT 
TTACGGGATG AAAATACGCA GAAAGTTAAT CTGGGTATTG GTCTTTATTA CGATCAGCAA
GGGCGGATCC CACTGATGCA AGCGGTTGAG GCCGCCGAGC GGCAGTTGCT CGATCAGCGT
CGCCCGCATG GATATCCGCC GATAGAAGGC TCGGCGCTGT TTGCCCAGCA GGTACAGACC
TTGTTGTTCG GTGAAGCGGC ATCAGCGTCG ATTAGCACGG TACAAACCGT TGGTGGTTCA
GGTGCTCTGA AGCTGGCGGC GGATTTTATC CATCACTACC TGTCCCGCCA TGATATCTGG
GTGTCAGATC CTACCTGGGC CAACCATTGG GCGATCTTCG AGGGCGCCGG GCTGAAGGTA
CATACCTATC CGTATTTCGA TGAGGCCAAC GGCGGCCTGC GTTTTGACGC CATGCTCGAT
ACGTTGGACA GCCTGCCGGA AGGCAGCGTG GTGCTGTTGC ACCCTTGCTG TCATAACCCG
ACCGGCACCG ATCTCAGCCC GGCGCAGTGG CGTGCCACGC TTGAGGTGGT GCAGCGCCGC
CGCCTGCTGC CGTTGTTCGA TATTGCCTAT CAGGGCTTTG GCGATAGTCT GGACGAGGAT
TGTTTTGCGC TGCGTGAGGC ATTGAAAACC GACCTGGAAT TTTTGGTCGC CAATTCGTTT
TCGAAAAACG TCGCGCTGTA TGGCCAGCGG CTGGGGGGGC TTTCGGTCCG CTGCGCCAGT
CCGGAGAGTG CGAACAACCT CAAGGACGCG TTGAAAACCT TGATCCGCCG CAGCTATTCC
TGCCCGCCGA CTCACGGCAG CCAGATTGTG GAAACGCTGT TGGCGGATGC CAACTTGCGC
CAGCAGTGGG AAAGCGAACT GGCCGGCATG CGTCAACGTA TCAAACAGAT GCGTCAAACC
CTGGCTAACG GGCTGGAGCA GGGCGGTTCG CCGTTGGACT ACCGGCGCAT TCGCGACCAG
AAAGGCATGT TCAGTTACAC CGGATTGAAC CCGCAGCAGC TCGAGCGGCT ACGGCAAGAT
TACGCCATCT ATCTGGTGGC GCCCGGCCGC ATGTGTTTGC CCGGCCTGAA TCAAAACAAT
GTCGACTACG TGACTGCCGC CATCCTGGAT GTCACCCGTA CTGTGTGA
 
Protein sequence
MFNHIGRSAA DPIMSLMEAY LRDENTQKVN LGIGLYYDQQ GRIPLMQAVE AAERQLLDQR 
RPHGYPPIEG SALFAQQVQT LLFGEAASAS ISTVQTVGGS GALKLAADFI HHYLSRHDIW
VSDPTWANHW AIFEGAGLKV HTYPYFDEAN GGLRFDAMLD TLDSLPEGSV VLLHPCCHNP
TGTDLSPAQW RATLEVVQRR RLLPLFDIAY QGFGDSLDED CFALREALKT DLEFLVANSF
SKNVALYGQR LGGLSVRCAS PESANNLKDA LKTLIRRSYS CPPTHGSQIV ETLLADANLR
QQWESELAGM RQRIKQMRQT LANGLEQGGS PLDYRRIRDQ KGMFSYTGLN PQQLERLRQD
YAIYLVAPGR MCLPGLNQNN VDYVTAAILD VTRTV