Gene Spro_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3084 
Symbol 
ID5604359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3393709 
End bp3394305 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content57% 
IMG OID640938625 
Productphenylacetic acid degradation protein PaaY 
Protein accessionYP_001479313 
Protein GI157371324 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID[TIGR02287] phenylacetic acid degradation protein PaaY 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.264252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGT ATCAGATTGA TGGCCTGACG CCAGTGGTAG ACCCCAGCAG CTATGTGCAC 
CCGACGGCGG TATTGATTGG CGATGTGATC GTCGGCAAAC AGGTGTATAT AGGCCCCAAT
GCCAGCCTGC GCGGCGACTT TGGCCGCCTG GTAATCGGCG ACGGTGCCAA TATTCAGGAC
AACTGCGTGA TGCACGGCTT TCCGCAGCAG GACACCGTGG TCGAACAGGA CGGGCACATC
GGCCACGGCG CAATATTGCA CGGCTGTCGT ATCCGCCGTA ACGCCATGGT CGGCATGAAT
GCGGTGATTA TGGACGGCGC GGAGATCGGT GAAAACACCA TCGTCGGTGC CATGGCGTTC
GTTAAGGCCG CCGCGGTGAT TGAAGCCAAC AAGCTGGTGG TTGGTAGTCC GGCACGGGTA
TTGCGTGACC TGACCGAACA GGAACTGGCG TGGAAAGTGG CCGGCACGCG CGAATATCAT
GATTTGGTGC TGCGCTGTAA ATCTTCACTG CAAGAAGTCG CCCCACTGAG CGAAATCGAA
CCGGGCCGTC AGCGCTTAAG TTTTGGCGAT CACCTGATCC CAAAAAATCA GCTTTAA
 
Protein sequence
MPVYQIDGLT PVVDPSSYVH PTAVLIGDVI VGKQVYIGPN ASLRGDFGRL VIGDGANIQD 
NCVMHGFPQQ DTVVEQDGHI GHGAILHGCR IRRNAMVGMN AVIMDGAEIG ENTIVGAMAF
VKAAAVIEAN KLVVGSPARV LRDLTEQELA WKVAGTREYH DLVLRCKSSL QEVAPLSEIE
PGRQRLSFGD HLIPKNQL