| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3079 |
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| Symbol | |
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| ID | 5604351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3388195 |
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| End bp | 3389715 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640938620 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001479308 |
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| Protein GI | 157371319 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0640912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CGAACTTAAA CCTCAGGGTG GCGGTGATTG GTGCCGGTAC CATGGGTATC
GGTATTGCTC AGGTGGCCGC CGCCGCCGGG CATCAGGTGC AGCTGTTTGA TATTGCCGCC
TCTGCTGCCC GGCAGGCACT CGGCGCTCTC GCCCAACGGC TGCGTCAGCG TGTTGCGGCC
GGCAAGGCCG ATGCCACCAC CACCGAAGCC CTGCTGGCGC GCATTCAGCC GGCAGAGTCG
CTTAACTCGC TGGCCGACAG CGGTCTGGTG ATAGAAGCGG TGGCGGAAAA GCTGGCAATC
AAACAAAGCC TGTTCCGTGA GCTGGAAGCC CTGTGCTCAC CCGCCACGCT GTTTGCCAGC
AACACCTCCT CGCTGTCGAT TACCGCCATC GCCGGTGCGC TGCAACATCC ACAGCGTCTG
GCCGGGCTGC ACTTCTTCAA CCCGGCACCG CTGATGAAGC TGGTGGAGAT CGTCAGCGGG
CTGGACACCA GCACCGAAAC CGTCGCCACA CTGCAAAGAC TAACCCGGCA ATGGGGCAAA
CAAAGCGTGC TGTGCCGCTC CACGCCGGGG TTCATCGTTA ACCGGGTGGC GCGACCGTTT
TATGCCGAGG CCCTGCGCGC GCTGGAAGAA CAGGTCGCTG ACGCCGCCAC GCTGGATGCG
GTGATACGCG ACGCGGGTGG CTTCGTCATG GGGCCACTGC AACTGACCGA TATGATTGGT
CAGGATATCA ATTATGCCGT GACCGAATCG GTGTTTCAGG CTTTCTTCCA GGATCCCCGG
TTTACCCCGT CGCTGGTACA GCAGGAACTG GTGGCGGCCG GGCGTCTTGG CCGCAAAAGT
GGCCGTGGTT TTTATCGCTA TGGCGATCAT CAGCCGCCGG TCGCTGCCGT TCTGCCTGCC
TCTACGGCAG CATTGCCGCG CAGCATCACA CTGCATGGCG ATGCCGCCGG TATCGCGCTA
CTGAGCAAAT TACTGAGCGG AAATGCGCAG TCGATCAAAC AATCTGGCCA GACCAGCGCC
TACGCCCGGA TCGATGAAGT TACACTTATG TTAACTAATG GTAAAACAGC CAGCCAGGTG
GCCGATGAAA CCGCAACTCC GGTGGTGCTG TTTGATCTGT CTGCCGACTA CTCGCAGGCC
ACCACCGTCG CTATCAGCTG CGCGGCGCAA AACGATGACC GGCACAACGC CACCATCATG
CGTCTGCTGC AATCTCTCGG CAAGAAGGTG ATCGCTTTGC CGGACTATCC CGGCCTGCTG
GTGATGCGCA CCCTCGCCAT GTTGGCCAAT GAGGCGCTCG ACGTGGTGAA CAAAGGCGTC
GCCAGTGCCG AGGATACCGA CCACGCCATG CGCTACGGCG TCAATTACCC ACGCGGCCCG
CTGGAATGGG GGACGGCTCT GGGTTGGCGA CACATCCTCA CCACGCTGGA AAACCTGCAA
CTCTACTACG GTGAGCCACG TTATCGCCCA ATGCCGCTGC TGCGTCATTA CGCATCCCTC
TCTTCAGGAG CCCAACCATG A
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| Protein sequence | MNQPNLNLRV AVIGAGTMGI GIAQVAAAAG HQVQLFDIAA SAARQALGAL AQRLRQRVAA
GKADATTTEA LLARIQPAES LNSLADSGLV IEAVAEKLAI KQSLFRELEA LCSPATLFAS
NTSSLSITAI AGALQHPQRL AGLHFFNPAP LMKLVEIVSG LDTSTETVAT LQRLTRQWGK
QSVLCRSTPG FIVNRVARPF YAEALRALEE QVADAATLDA VIRDAGGFVM GPLQLTDMIG
QDINYAVTES VFQAFFQDPR FTPSLVQQEL VAAGRLGRKS GRGFYRYGDH QPPVAAVLPA
STAALPRSIT LHGDAAGIAL LSKLLSGNAQ SIKQSGQTSA YARIDEVTLM LTNGKTASQV
ADETATPVVL FDLSADYSQA TTVAISCAAQ NDDRHNATIM RLLQSLGKKV IALPDYPGLL
VMRTLAMLAN EALDVVNKGV ASAEDTDHAM RYGVNYPRGP LEWGTALGWR HILTTLENLQ
LYYGEPRYRP MPLLRHYASL SSGAQP
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