| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3076 |
|---|
| Symbol | |
|---|
| ID | 5604327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3385556 |
|---|
| End bp | 3386614 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640938617 |
|---|
| Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| Protein accession | YP_001479305 |
|---|
| Protein GI | 157371316 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.163455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCT TCCATCGCCT GAACGTCGCC GCCATCGAGC GCGAAACGCC GGACGCCGTA
GCCATCACTC TGCGGGTACC CGAAGAACTG AAAAGTCACT ATTGCTATAC GCCCGGCCAG
CACCTGACGT TGAAGGCGCT GGTCGACGGC GAAGAGCTGC GCCGCTGCTA CTCCATTTGC
AGCTCGCCGC AGGAAGGTTT GCTGCAAATC GGCGTTAAAG CCATTCATCA GGGCCGCTTC
TCTTCGTTCG TTAACCGGCA GCTGTTGGTC GGTGATGCGC TGGAAGTGAT GGTGCCGCAA
GGGCGATTCG GCTATCAACC GCAGGCGGAG AACAGCGGTA ACTATCTGGC GATTGCGGCC
GGTTCCGGCA TTACGCCGAT GCTGTCGATC ATCAAGGCCA CGTTGCAACT CGAGCCAAAC
AGCAGCTTCA CGCTGATTTA CGGCAACCGC AGCAGCCGCT CGGTGATGTT CAAAGAAGCA
CTGTCCGATC TGAAGAACCG CTATCCCCAG CGCTTTCAGC CGCTGTACCT GTTCAGCCAG
GAAAATCTTG ATAGCCCACT GCTCAGCGGC CGCATCGACC GTGAGCACCT GCTGGCGATC
GGCGATGCAT TACTCAATTA CCGCGACTAT GACCACGCCT TTATCTGCGG GCCTGAGAGC
ATGATGGACG ACGCCCAGAG CGTACTTGAA CAGGCTGGCA TGCCCGCCGG GCACATTCAC
AGCGAACGTT TTAACACCAG CGGTATGGTT GCCCGGCCGG TCAATGACGC CAACCGCAAC
GCCACCCGGG TCGAAATTTT GCTCGATGGC CGTCGGCTGG ATATCGAAGT AGGCGCCCAG
GATGACAGCA TTCTGGATGC GGCGCTGCGT CAGGGTGCTG ACCTGCCCTA CGCCTGCAAA
GGCGGGGTGT GCGCGACCTG CAAGTGCCGG TTAAAGGCCG GTCAGGTGGA TATGGCGGTT
AACTACAGCC TGGAGCCGGA TCAACTGGCG GCGGGTTACG TATTGAGTTG TCAGTCGTGG
CCGCGTGGCG ACGGTGTGAT ATTGGACTTT GACGTATAG
|
|---|
| Protein sequence | MTVFHRLNVA AIERETPDAV AITLRVPEEL KSHYCYTPGQ HLTLKALVDG EELRRCYSIC
SSPQEGLLQI GVKAIHQGRF SSFVNRQLLV GDALEVMVPQ GRFGYQPQAE NSGNYLAIAA
GSGITPMLSI IKATLQLEPN SSFTLIYGNR SSRSVMFKEA LSDLKNRYPQ RFQPLYLFSQ
ENLDSPLLSG RIDREHLLAI GDALLNYRDY DHAFICGPES MMDDAQSVLE QAGMPAGHIH
SERFNTSGMV ARPVNDANRN ATRVEILLDG RRLDIEVGAQ DDSILDAALR QGADLPYACK
GGVCATCKCR LKAGQVDMAV NYSLEPDQLA AGYVLSCQSW PRGDGVILDF DV
|
|---|
| |