| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3068 |
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| Symbol | |
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| ID | 5604302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3376718 |
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| End bp | 3378268 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640938609 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001479297 |
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| Protein GI | 157371308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.608977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC AGCAACTGCA GGATGCCGAA CGGCCTCGCA ACGGTAAAAA CTCCCCGTTA
TTATTTCAGG CCGGCGTGTT TGTCGTCATC GTTGCCGTTA CGCTGATCCT GTTTAACGCC
TGGCAAATTT GGAATGCCCA TCAGCGCGAC TTGCAAAGTG CCGAGAATGA ATCCGCCAAT
TTGGCCCGTG CGCTGGCGCA GCATGCCGAT GACACCTTTA TGCAGACCGA CAGTACGCTG
TCCGACCTGA GTGAACGCAT TCAGGTTGAC GGGCTGGCTC GCCCACAGCT GTTACGATTG
CAAAAAGTGA TGCAAACACA GGTGGGTAAC CTGCCACAAC TGCACGGGCT GTTTGTTTAC
GATGCGCAAG GTAATTGGGT CGTCACTTCA TCAGGCCGCT TTGTACAAAA CGCCAACAAT
GCCGACCGGG AATATTTTAA ATACCACCTC GAGCACAACA GCAATGCAGT TTATATCGGC
AAGGTGGTGC GCAGCCGCTC TACCGGCGAT TTGATCATTC CGGTATCACG CCGTTTCAAC
CACCCGGACG GCAGCTTTGC CGGGGTCGTG CTGGCCACAT TGTATATCAA TTATTTCCGC
CAGTTTTACG ATACCTTTGC ACTAAACAGC GATGCTTCAC TCAATCTGCT ATTGGCGGAC
GGCACCATTC TCTACCGTCG CCCTTATTCC CTGGCGGCCA TCGGCAAGAA TATTTCCGAG
GGCGTGTTGT TCCGGGAAAT ATTGCCACAT TCCGAATTCG GCAATGCCAC CATTACCTCG
CGCTACGACA AGGTAGAACG GATTTACGGC TATTCACGGG TTACCCGCTA TCCACTGGTG
ATTGCCGCCG GGTTGTCGAA AAAAGACGTG CTGGCTGATT GGCGCAACGA TTCCGGCCTG
TTTGCCCTGG GTGGTGCCAC CCTGCTGGCG ATCCTGTTGG CGATGGGGAT GGTGTTGATG
CGTCAGATAA ACCACAGCGT ACGCACCGAA GCCGAACTGA TGCGCACTCG CGATCAGCTC
ACCAGTATCA ACCGCACCCT GGAAGAACTG GCCTTGCTGG ACGGCCTGAC CGGGCTGGCC
AACCGCCGTC AGTTTGATAT CGCCTTAAAG AATGAGCTGA TGCGCGCCTC ACGCAACTAC
CGCAGCGTGG CGCTGTTGAT GTTGGATATT GACTATTTCA AGCAGTATAA CGACATCTAT
GGCCACGTTG CCGGCGACCA GTGTCTGCAA CAGATCGGAC AAATGCTCAA GGGAATGGCC
AGCCGCAGCA ACGACATTAT GGCCCGCTAC GGCGGCGAAG AAATGGCCAT CATCTTGCCG
GATACCGACG CCCAGGGTGC ACTGATTTTC GCCGAGCGCG TCATTGAAGC GGTGCGGGAG
CTAAAAATAC CTCATGATGG CAACCCACAT GGCGTCATCA CCATCAGCAT AGGGATCTAC
GCCAAGGTGC CGCATATGTA TAACGACACG CCGATGAGCT TTATCAATCA GGCGGACAGC
GCACTGTACC AAGCGAAAGC CCAGGGAAAA AACCGTATTT ACTCCGCTTA A
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| Protein sequence | MTQQQLQDAE RPRNGKNSPL LFQAGVFVVI VAVTLILFNA WQIWNAHQRD LQSAENESAN
LARALAQHAD DTFMQTDSTL SDLSERIQVD GLARPQLLRL QKVMQTQVGN LPQLHGLFVY
DAQGNWVVTS SGRFVQNANN ADREYFKYHL EHNSNAVYIG KVVRSRSTGD LIIPVSRRFN
HPDGSFAGVV LATLYINYFR QFYDTFALNS DASLNLLLAD GTILYRRPYS LAAIGKNISE
GVLFREILPH SEFGNATITS RYDKVERIYG YSRVTRYPLV IAAGLSKKDV LADWRNDSGL
FALGGATLLA ILLAMGMVLM RQINHSVRTE AELMRTRDQL TSINRTLEEL ALLDGLTGLA
NRRQFDIALK NELMRASRNY RSVALLMLDI DYFKQYNDIY GHVAGDQCLQ QIGQMLKGMA
SRSNDIMARY GGEEMAIILP DTDAQGALIF AERVIEAVRE LKIPHDGNPH GVITISIGIY
AKVPHMYNDT PMSFINQADS ALYQAKAQGK NRIYSA
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