Gene Spro_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3048 
Symbol 
ID5604147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3359448 
End bp3360320 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID640938589 
ProductLysR family transcriptional regulator 
Protein accessionYP_001479277 
Protein GI157371288 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAATG ACTCGATCCC ACTGCACATT CTGCCGACCT TTGTGATTGC CGCCCGGTTA 
GAGAATTTGC GCGCTACTGC CCTGCAAGTA CATCTTACCC ATGGTGCCGT CAGCCAGCAG
ATCCAACAGC TCGAACGGGC AATCGGCTGC CCGCTGTTTG AACGGCAGGG GCGCGGGCTG
CGCCTGAATA GCGCCGGACG TGAGCTGTTG GCCGTTGCCG AACCGGCGCT GCAGGCATTG
CAGCAAGGCG TCAGCCGGGT CAGGAGGATT GCGCAAAGTC AGGCTCTGCG TATCAGCGTG
CTGCCCTCTT TTGCGCATTA CTGGTTAATG CCGCGTCTGC CATCTTTTCA TACGGCCTGT
GCCGATATTG CGTTGGATAT CGACGCCTCG CTGGTAGTGC AGGATCTGGT GCGCAAAGGG
TTTGATGCGG CCATCCGCCT CGGCAATGGT CAATGGGCAG AGATGCAGGC ACAGTGGATT
GCCTCCGGAG AGGTGGTGCC GGTGGCTACC CCGGCGCTGG CCGACCAGTG GCAGGCAGCA
TTTGACCGTG GCGCATCAGG CATACCGCTG TTGGAACATG ATGTTACGCC GTGGCGTAGC
TGGTTCACTG CGCATCAGCA GGTGGAGTCC GGCCGCCCCT TGGCGTTATT CAATGATGCG
GGATTGTTGA TCCGCGCGGC TGAGCAAGGG TTTGGCATCG CGCTGGTGAA AAAACTACTG
GTGAGTGATG CGTTGGCAGA GGGCCGCTTG ACCGCACTGG CACCGGCACG ACATCTTGAT
CAGATAGACT TTTATCTGGT TTGGCCGCAA ACCGCCGGAT TGACGCCGGC GGTCGAAGCA
TTATTGCACT GGTTGCAGCG GAAACTGGCC TGA
 
Protein sequence
MLNDSIPLHI LPTFVIAARL ENLRATALQV HLTHGAVSQQ IQQLERAIGC PLFERQGRGL 
RLNSAGRELL AVAEPALQAL QQGVSRVRRI AQSQALRISV LPSFAHYWLM PRLPSFHTAC
ADIALDIDAS LVVQDLVRKG FDAAIRLGNG QWAEMQAQWI ASGEVVPVAT PALADQWQAA
FDRGASGIPL LEHDVTPWRS WFTAHQQVES GRPLALFNDA GLLIRAAEQG FGIALVKKLL
VSDALAEGRL TALAPARHLD QIDFYLVWPQ TAGLTPAVEA LLHWLQRKLA