Gene Spro_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3038 
Symbol 
ID5604119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3347133 
End bp3347813 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content58% 
IMG OID640938579 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_001479267 
Protein GI157371278 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.709387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TTACACATCA ACAGTTGGCC GAACGTATTG CCCGCGATAT CCCGGAAGGT 
GCCTACGTCA ACCTGGGCAT TGGGATCCCA ACCCAGATAG CCAACTTCCT GCCGGCGGAT
AAAGAGATCT TCCTGCACAG CGAAAACGGC ATTCTCGGGA TGGGCCCGGC ACCGGCGGCC
GGCCAGGAAG ATCCCGAACT GATCAACGCC GGTAAACAGC CGGTCACCCT GCTCAAAGGC
GGCTGCTTTT TCCATCACGG CGACTCTTTT GCCATGATGC GCGGTGGTCA TCTGGATATC
TGCGTGCTCG GCGCCTATCA GGTTTCCGAA CGCGGCGATC TGGCCAACTG GAGTACCGGC
GCAGCGGGGG CAATCCCGGC GGTCGGCGGC GCAATGGATC TGGCGATTGG CGCCCGTCAG
GTGTTTGTGA TGACCGAACA CCTGACCAAA AAAGGCGAAT GCAAAATTGT TCAGCACTGT
ACTTATCCCC TGACCGGCGT CGGCTGTATC GATCGCATCT ACAGCGATCT GGCGGTGATG
GACGTGACTT CTCAGGGTCT GGTGGTACGC GAAATATTTG GTGGGCTGAC CCCGCAGCAA
TTGCAAGCAG TCACCCCGGT CGAACTGACC TTTGCCCTTC AGCACGGAGA ACCACCGCAT
GATCCCCGCT TACCTGTGTG A
 
Protein sequence
MTKLTHQQLA ERIARDIPEG AYVNLGIGIP TQIANFLPAD KEIFLHSENG ILGMGPAPAA 
GQEDPELINA GKQPVTLLKG GCFFHHGDSF AMMRGGHLDI CVLGAYQVSE RGDLANWSTG
AAGAIPAVGG AMDLAIGARQ VFVMTEHLTK KGECKIVQHC TYPLTGVGCI DRIYSDLAVM
DVTSQGLVVR EIFGGLTPQQ LQAVTPVELT FALQHGEPPH DPRLPV