Gene Spro_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3025 
Symbol 
ID5604073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3328606 
End bp3329607 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content60% 
IMG OID640938566 
Product4-hydroxy-2-ketovalerate aldolase 
Protein accessionYP_001479254 
Protein GI157371265 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR03217] 4-hydroxy-2-oxovalerate aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTC TCATTAACGA TTCAACCCTG CGCGATGGTC AGCATGCGGT AAAACACCAA 
CTCACTGCGG CGCAGTTGCG AAGCTACGCC ACGGCGGCAG ACAAAACCGG CGTGGCGATA
GTTGAAGTCG GCCACGGTAA CGGGCTGGGG GCTTCCTCCT ATCAGGTGGG GCGTGCGGCA
TTGAGTGACG AAGAGATGCT GACCACCGTG CGCGAGTCTT TGCAAAACAG CAAGATGGGG
GTGTTTATGT TGCCCGGTTG GGGCACCATC GCCGACTTGA CCAAAGCTCT GGCTTACGGC
ACGGATGTGG TGCGCATTGG TACCCATTGT ACCGAGGCGA CGCTGGCCGA ACGCCATCTG
GGTTGGCTGC GGGAACAGGG CGCTGAGGCT CATGCGGTGC TGATGATGAG CCATATGGCA
AGCCCGGCCG AGTTGGCTGA CCAGGCTGAG TTATTGGTGG GTTACGGCGC CCAGGCGGTC
GGCATTATGG ATTCGGCCGG CAGTCTTTTG CCGCAGGATG TCACCGCACG TATTACGGCC
ATGCGCATGC AGGTAAAGGT GCCGCTGATT TTCCACGCGC ATAACAACCT GGGCATGGCG
GTGGCGAATT CGCTGGCCGC CGTTCAGGCG GGCGCCGGCA TTATTGACGG CTGCGCTCGT
GGGTTTGGTG CCGGGGCGGG CAATACCCAA CTGGAAGTGC TGATCCCGGT ATTGGAGCGC
CTGGGTTTCA ACACCGGCAT CGATCTCTAT CATTTTCTGG ATGCCGCCGA TCTCGCCGCC
AGAGAGTTAA TGGTGGTTCC GCCAATGATT GACTCTCTGG GCATCGTCAG CGGTCTGGCC
GGTGTCTTCT CCGGCTTCAA AAGCCCGGTG CTAAACCATG CAGGCAGCGC CGGGGTGGAT
GCGCGCGATG TCTTCTTCGA ACTGGGACGA CGACAAATTA TTGCCGGGCA GGAAGACCTG
ATCGTTGAGG TTGTCGCCGA ACTGAAGAGG GCGGCCTCAT GA
 
Protein sequence
MTILINDSTL RDGQHAVKHQ LTAAQLRSYA TAADKTGVAI VEVGHGNGLG ASSYQVGRAA 
LSDEEMLTTV RESLQNSKMG VFMLPGWGTI ADLTKALAYG TDVVRIGTHC TEATLAERHL
GWLREQGAEA HAVLMMSHMA SPAELADQAE LLVGYGAQAV GIMDSAGSLL PQDVTARITA
MRMQVKVPLI FHAHNNLGMA VANSLAAVQA GAGIIDGCAR GFGAGAGNTQ LEVLIPVLER
LGFNTGIDLY HFLDAADLAA RELMVVPPMI DSLGIVSGLA GVFSGFKSPV LNHAGSAGVD
ARDVFFELGR RQIIAGQEDL IVEVVAELKR AAS