Gene Spro_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3012 
Symbol 
ID5604013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3313058 
End bp3314131 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content62% 
IMG OID640938553 
Producthypothetical protein 
Protein accessionYP_001479241 
Protein GI157371252 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.793023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACTC TTGACGCCGA GGCGGAACTG ACGGCACCGC CACAGATCAA TGCCTTGCAC 
CGCCTGCCGG AGGATTTCTG GCTGCGGCTC GGCAATGCGC CTTATAAACA CGATTTGTTT
CAGCTGCTGC GGCGCCTCGA CGCCCAGGGC GGCCAGCCAT ACCTGCTGGG CCGTGCCCCC
CTGCCGCGCC ATGAGATGCT GCGGCTGGGG CAAGAACCTT CACTGTCGTT CGCTCCGTCG
ACGCTGGCAC AGGTCAGCCC ACGGCCGCAA AGCTCGCTGC ACGACGTTTC TATTTTCAGC
TTTGGCCTGT TTGGCCCCAA CGGGCCGCTG CCGCTGCACC TGACCGAATA CGTGCGTGAA
CGGGTCTATC ACCACCAGGA CACCACCCTG CTGGCCTTTG CCAACCTGTT TCACCACCGG
CTGACGCTGC TGTTTTACCG CGCCTGGGCC GACGCACAGC CCACGGTATC GCTGGATCGT
CAGGATAACC GGCGTTTCGA CCAATACCTT TCCAGCCTGA TTGGCATCGG CCAGCCGGCA
CAGCAGCAGC GCGACAGCAT CAATGCCCAT GCCAAGCATT TTATGGCCGG TCATCTGATT
CGCCACAGCC GCGATCCGGA AGGCCTGAGC AAAATCTTGC AGCAGTATTT CAAGGTGCCG
GTGCGCATCG TGGAAAACGT CCCGCACTGG CTGCGGGTAG AACCGCGCGA ACAGGCGCGC
CTGAAGGCCG GTCGCGGCGC CCCCCGGCTC GGTGAGTCTT CGTTCCTCGG GATTGCCGTG
CGCGATATTC AGCACAAATT CCGCATCGAA CTGGGGCCGA TGTCGCAACA AAACTATGAA
GGCTTCTTGC CCGGAGCCGA ACTGTGCCGG CAGTTGCGCG ACTGGGTGCG CCAGTATCTG
GGCATTGAGT TTGTTTGGGA ACTGCGGCTG ATCCTGGCCA AGGATCAGCT CAGCGGCACC
CAACTCGGCG GTGCCCAGCG CCTGGGATTA AGCAGTTGGC TGGAAGACGC CCGTCAGCAA
CGCGACCTTG ACGATCTGAT CTTCAGCCCC GAACCGCTGG AAAACCCGTT CTGA
 
Protein sequence
MSTLDAEAEL TAPPQINALH RLPEDFWLRL GNAPYKHDLF QLLRRLDAQG GQPYLLGRAP 
LPRHEMLRLG QEPSLSFAPS TLAQVSPRPQ SSLHDVSIFS FGLFGPNGPL PLHLTEYVRE
RVYHHQDTTL LAFANLFHHR LTLLFYRAWA DAQPTVSLDR QDNRRFDQYL SSLIGIGQPA
QQQRDSINAH AKHFMAGHLI RHSRDPEGLS KILQQYFKVP VRIVENVPHW LRVEPREQAR
LKAGRGAPRL GESSFLGIAV RDIQHKFRIE LGPMSQQNYE GFLPGAELCR QLRDWVRQYL
GIEFVWELRL ILAKDQLSGT QLGGAQRLGL SSWLEDARQQ RDLDDLIFSP EPLENPF