Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3002 |
Symbol | |
ID | 5603880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3302089 |
End bp | 3303114 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640938543 |
Product | ImpA domain-containing protein |
Protein accession | YP_001479231 |
Protein GI | 157371242 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCG ACACCCTGTT AGCCCCGGTT GACGCAGAAA ATCCCTGCGG CGAAAACCTG GAATATGACA CCGATTTTCT GGCGATGGAG CAGGCTGCGA CCGGTAAGAG CGAGCAGCAG TTCGGCAGCA CTATCATTCC GGCAGAAGCA CCGGACTGGG TGCAGGTGGA ACGGCTCGCG ACCACGCTGC TGATGCGTAC CAAAGATTTA CGGGTGATGC TGTGCCTGAC CCGCGCCTGG ACGCAACTGC GCGGATTGCA AGGTTACGCC GACGGTCTGA TGCTGATCCA CCAGGCGCTG GAGCGCTACT GGGACACGCT GCTGCCGTTG CTGGAGTTCG ACGGCGAGGC TGACCCGCTG TTTCGCATCA ACGTGCTGGC CGATCTCGGC GACAAGGCCG CGCTGACCAC CAGCGTGCGC GCCGCGCCGC TGCTGAAAGG GGCTACCGGT GAAATCTCGC TGCGCGACGC CGGGGCCCTG CTCGACGGCA GTAAGCTCGA GTGCCCGACC TTTCCTGGTG GCCGTGCGCG CCTGCAGGAT GAACTGTCTC AGCCGGAGCG CCCGGAGGCG CAATTGGTGA TACGCATCGC CGAAACCCTC GCTGCCATCC GTACTACGGT CACTCGCCAT TTAGGCGAAA GCGCCCTGCC GGAAATGCAC AACCTGACAA AAATTTTCGC CCTGGTCGCT CAGTTCGGCC AGGACAGCGC CCCGGCCAGC GAGTCAGCCG AACAGCCAAA TGACGCCGCC GTACCACCGA CCAGCGCTGC CGCAGCGGCC CCGGCCGCCA CGCTCAACTG GCGCAGTGCG CAAATACAGT CACGCGACGA CGCCCAACTG ATGCTGGACA AGGTAAAACA CTATTTCCGT CTTCATGAGC CCAGCCACCC GGCGCCGCTG ATGATCGACC GGGTACAGCG GCTGATTGCA CTGGACTTTA TGCAAATAAT CCGCGATTTG GCACCCGATG GTCTTAACCA ACTGGAGACC ATTCTAGGTC GCCCCGATAA CGAGGAGAAC AACTAG
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Protein sequence | MAIDTLLAPV DAENPCGENL EYDTDFLAME QAATGKSEQQ FGSTIIPAEA PDWVQVERLA TTLLMRTKDL RVMLCLTRAW TQLRGLQGYA DGLMLIHQAL ERYWDTLLPL LEFDGEADPL FRINVLADLG DKAALTTSVR AAPLLKGATG EISLRDAGAL LDGSKLECPT FPGGRARLQD ELSQPERPEA QLVIRIAETL AAIRTTVTRH LGESALPEMH NLTKIFALVA QFGQDSAPAS ESAEQPNDAA VPPTSAAAAA PAATLNWRSA QIQSRDDAQL MLDKVKHYFR LHEPSHPAPL MIDRVQRLIA LDFMQIIRDL APDGLNQLET ILGRPDNEEN N
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