| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2993 |
|---|
| Symbol | |
|---|
| ID | 5603850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3291233 |
|---|
| End bp | 3291880 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640938534 |
|---|
| Product | pyrrolidone-carboxylate peptidase |
|---|
| Protein accession | YP_001479222 |
|---|
| Protein GI | 157371233 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
|---|
| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGG TATTAGTGAC GGGTATAGAG CCGTTTGACG GCGACGCGAT TAATCCTTCA
TGGCAGGTCG CGCAAGCTCT GGCCGGGGAA CAGGTGGCGG GTGCGGAGGT GGTGGTACGT
CAATTGGCTT GCGTGCTGGG TTTGTCCAAC CAGCAGCTCA TTGCCGCGAT TGAAGAGTTG
CGCCCAAAGG TGGTTATCTG CCTGGGACTG GCGGGGGGGC GCGGCGAAAT CTCGATTGAG
CGGGTGGCCA TCAACCTGAT CGATGCCCGT ATTCCTGATA ATGCCGGTAA ACAACCGATA
GATATCCCGG TGGTGGAGGG CGGCCCGGTG GGCTATTTTT CCACGTTGCC GGTGAAGGCG
ATTGTGCATC ATCTGCGTCA GTCAGGCATT CCGGCTGTGG TTTCACATAC GGCGGGGACC
TACAATTGCA ACCAGCTTTT TTATGGCCTG AGTCACCATA TCGCCAGCCA TAATCTGGCG
ATCAAGGGCG GTTTTATCCA CATTCCTTAC AGCCATGAGC TGGCGGTCAA TCATCCGGGA
AAACCAAGTA TGGCGTTAGC GACGATGGTC GCGGCGGTGC GCAGTATTGT GCATACCGCG
CTGACGGTGG GGGAAGATTT AACCATCACC GGGGGAGCGC TGCATTGA
|
|---|
| Protein sequence | MDRVLVTGIE PFDGDAINPS WQVAQALAGE QVAGAEVVVR QLACVLGLSN QQLIAAIEEL
RPKVVICLGL AGGRGEISIE RVAINLIDAR IPDNAGKQPI DIPVVEGGPV GYFSTLPVKA
IVHHLRQSGI PAVVSHTAGT YNCNQLFYGL SHHIASHNLA IKGGFIHIPY SHELAVNHPG
KPSMALATMV AAVRSIVHTA LTVGEDLTIT GGALH
|
|---|
| |