Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2939 |
Symbol | fliA |
ID | 5603385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3239148 |
End bp | 3239870 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640938480 |
Product | flagellar biosynthesis sigma factor |
Protein accession | YP_001479168 |
Protein GI | 157371179 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGATT TGTATACCGC CGAAGGCGTG ATGGACAAAA ATTCTCTCTG GCTACGCTAC GTTCCGTTAG TGCGCCACGA GGCGTTGCGC CTGCAGGTCA GGCTGCCCGC CAGCGTGGAG CTCGACGATC TGTTGCAGGC CGGAGGAATC GGCCTGTTGA ACGCCGTTGA GCGTTATGAC GCTATGCAGG GCACGGCCTT TACTACCTAC GCGGTGCAAC GTATCCGTGG CGCCATGCTT GATGAGCTGC GCAGCCGCGA CTGGGTGCCG CGCAGTGTAC GTCGCCATGC GCGTGAAGTG GCGCAGGTTA TGCGGCAATT GGAACAGCAA CTGGGCCGCC CGGCCAGCGA AGTGGAAGTT GCGCAGACGC TGAATCTGTC ACTGGATGAG TACCGTCAAA TTCTGTTGGA CACCAATAAC AGCCAGCTTT TCTCCTACGA CGAATGGCGG GAAGAGCATG GCGAAAGTGC GGAACCGCTG CTGGAAGGGC ACGAAGAGGC CAATCCGTTA CATCATCTGC TGGAGGGCAA TCTGCGCCAA CGGGTGATCG ACGCCATCGA GGCGTTGCCG GAACGCGAGA AAATGGTGCT GACGCTGTAT TACCAGGAAG AGTTGAACCT GAAGGAGATC GGTGCCGTGC TGGACGTGGG GGAATCGCGA GTCAGCCAGC TGCACAGTCA GGCGATCAAG CGCCTGCGCG CCCGTTTGGC AAGCGAGAAC TGA
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Protein sequence | MSDLYTAEGV MDKNSLWLRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLNAVERYD AMQGTAFTTY AVQRIRGAML DELRSRDWVP RSVRRHAREV AQVMRQLEQQ LGRPASEVEV AQTLNLSLDE YRQILLDTNN SQLFSYDEWR EEHGESAEPL LEGHEEANPL HHLLEGNLRQ RVIDAIEALP EREKMVLTLY YQEELNLKEI GAVLDVGESR VSQLHSQAIK RLRARLASEN
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