Gene Spro_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2939 
SymbolfliA 
ID5603385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3239148 
End bp3239870 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID640938480 
Productflagellar biosynthesis sigma factor 
Protein accessionYP_001479168 
Protein GI157371179 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATT TGTATACCGC CGAAGGCGTG ATGGACAAAA ATTCTCTCTG GCTACGCTAC 
GTTCCGTTAG TGCGCCACGA GGCGTTGCGC CTGCAGGTCA GGCTGCCCGC CAGCGTGGAG
CTCGACGATC TGTTGCAGGC CGGAGGAATC GGCCTGTTGA ACGCCGTTGA GCGTTATGAC
GCTATGCAGG GCACGGCCTT TACTACCTAC GCGGTGCAAC GTATCCGTGG CGCCATGCTT
GATGAGCTGC GCAGCCGCGA CTGGGTGCCG CGCAGTGTAC GTCGCCATGC GCGTGAAGTG
GCGCAGGTTA TGCGGCAATT GGAACAGCAA CTGGGCCGCC CGGCCAGCGA AGTGGAAGTT
GCGCAGACGC TGAATCTGTC ACTGGATGAG TACCGTCAAA TTCTGTTGGA CACCAATAAC
AGCCAGCTTT TCTCCTACGA CGAATGGCGG GAAGAGCATG GCGAAAGTGC GGAACCGCTG
CTGGAAGGGC ACGAAGAGGC CAATCCGTTA CATCATCTGC TGGAGGGCAA TCTGCGCCAA
CGGGTGATCG ACGCCATCGA GGCGTTGCCG GAACGCGAGA AAATGGTGCT GACGCTGTAT
TACCAGGAAG AGTTGAACCT GAAGGAGATC GGTGCCGTGC TGGACGTGGG GGAATCGCGA
GTCAGCCAGC TGCACAGTCA GGCGATCAAG CGCCTGCGCG CCCGTTTGGC AAGCGAGAAC
TGA
 
Protein sequence
MSDLYTAEGV MDKNSLWLRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLNAVERYD 
AMQGTAFTTY AVQRIRGAML DELRSRDWVP RSVRRHAREV AQVMRQLEQQ LGRPASEVEV
AQTLNLSLDE YRQILLDTNN SQLFSYDEWR EEHGESAEPL LEGHEEANPL HHLLEGNLRQ
RVIDAIEALP EREKMVLTLY YQEELNLKEI GAVLDVGESR VSQLHSQAIK RLRARLASEN